############################################################################## ############################################################################## ### ### Running command: ### ### C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/NanoTube_1.0.0.tar.gz && rm -rf NanoTube.buildbin-libdir && mkdir NanoTube.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=NanoTube.buildbin-libdir NanoTube_1.0.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL NanoTube_1.0.0.zip && rm NanoTube_1.0.0.tar.gz NanoTube_1.0.0.zip ### ############################################################################## ############################################################################## % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 100 466k 100 466k 0 0 1029k 0 --:--:-- --:--:-- --:--:-- 1032k install for i386 * installing *source* package 'NanoTube' ... ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'NanoTube' finding HTML links ... done ExamplePathways html ExampleResults html NanoTube html deVolcano html fgseaPostprocessing html fgseaPostprocessingXLSX html fgseaToLEdge html gm_mean html groupFGSEA html groupedGSEAtoStackedReport html limmaToFGSEA html makeDiffExprFile html makeFGSEAmasterTable html makeNanoStringSetFromEset html nanostringPCA html negativeQC html normalize_housekeeping html normalize_pos_controls html nsdiffToFGSEA html positiveQC html processNanostringData html read_cpdb_sourceDBs html read_cpdb_tab html read_merge_rcc html read_rcc html read_sampleData html remove_background html runLimmaAnalysis html unzip_dirs html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'NanoTube' ... ** testing if installed package can be loaded * MD5 sums packaged installation of 'NanoTube' as NanoTube_1.0.0.zip * DONE (NanoTube) * installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library' package 'NanoTube' successfully unpacked and MD5 sums checked