############################################################################## ############################################################################## ### ### Running command: ### ### C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/InterCellar_2.0.0.tar.gz && rm -rf InterCellar.buildbin-libdir && mkdir InterCellar.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=InterCellar.buildbin-libdir InterCellar_2.0.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL InterCellar_2.0.0.zip && rm InterCellar_2.0.0.tar.gz InterCellar_2.0.0.zip ### ############################################################################## ############################################################################## % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 7 2382k 7 171k 0 0 640k 0 0:00:03 --:--:-- 0:00:03 641k 73 2382k 73 1743k 0 0 1373k 0 0:00:01 0:00:01 --:--:-- 1373k 100 2382k 100 2382k 0 0 1354k 0 0:00:01 0:00:01 --:--:-- 1355k install for i386 * installing *source* package 'InterCellar' ... ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'InterCellar' finding HTML links ... done annotateGO html annotatePathways html buildPairsbyFunctionMatrix html checkLL_RR html circlePlot html combineAnnotations html createBarPlot1_ggplot html createBarPlot2_CV html createBarPlot2_ggplot html createBarPlot_CV html createNetwork html dendroIntPairModules html elbowPoint html ensemblLink html getBack2BackBarplot html getBarplotDF html getBarplotDF2 html getClusterA_Names html getClusterColors html getClusterNames html getClusterNetwork html getClusterSize html getDistinctCouplets html getDotPlot_selInt html getGObiomaRt html getGeneTable html getHitsf html getIntFlow html getNtermsBYdb html getNumLR html getPieChart html getRadar_df html getRankedTerms html getSignif_table html getSignificantFunctions html getSignificantFunctions_multiCond html getSunburst html getUMAPipModules html getUniqueDotplot html getUniqueIntpairs_byCond html goLink html input.data html read.CPDBv2 html read.SCsignalR html read.cellchat html read.customInput html read.icellnet html run_app html subsetAnnot_multiCond html subsetFuncMatBYFlow html swap.RLint html uniprotLink html updateInputLR html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'InterCellar' ... ** testing if installed package can be loaded * MD5 sums packaged installation of 'InterCellar' as InterCellar_2.0.0.zip * DONE (InterCellar) * installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library' package 'InterCellar' successfully unpacked and MD5 sums checked