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This page was generated on 2022-04-13 12:06:45 -0400 (Wed, 13 Apr 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 20.04.4 LTS)x86_644.1.3 (2022-03-10) -- "One Push-Up" 4324
tokay2Windows Server 2012 R2 Standardx644.1.3 (2022-03-10) -- "One Push-Up" 4077
machv2macOS 10.14.6 Mojavex86_644.1.3 (2022-03-10) -- "One Push-Up" 4137
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

INSTALL results for InTAD on tokay2


To the developers/maintainers of the InTAD package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/InTAD.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 937/2083HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
InTAD 1.14.0  (landing page)
Konstantin Okonechnikov
Snapshot Date: 2022-04-12 01:55:07 -0400 (Tue, 12 Apr 2022)
git_url: https://git.bioconductor.org/packages/InTAD
git_branch: RELEASE_3_14
git_last_commit: 25795d0
git_last_commit_date: 2021-10-26 12:43:48 -0400 (Tue, 26 Oct 2021)
nebbiolo2Linux (Ubuntu 20.04.4 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
tokay2Windows Server 2012 R2 Standard / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
machv2macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published

Summary

Package: InTAD
Version: 1.14.0
Command: C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/InTAD_1.14.0.tar.gz && rm -rf InTAD.buildbin-libdir && mkdir InTAD.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=InTAD.buildbin-libdir InTAD_1.14.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL InTAD_1.14.0.zip && rm InTAD_1.14.0.tar.gz InTAD_1.14.0.zip
StartedAt: 2022-04-12 07:22:53 -0400 (Tue, 12 Apr 2022)
EndedAt: 2022-04-12 07:24:03 -0400 (Tue, 12 Apr 2022)
EllapsedTime: 69.5 seconds
RetCode: 0
Status:   OK  

Command output

##############################################################################
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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/InTAD_1.14.0.tar.gz && rm -rf InTAD.buildbin-libdir && mkdir InTAD.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=InTAD.buildbin-libdir InTAD_1.14.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL InTAD_1.14.0.zip && rm InTAD_1.14.0.tar.gz InTAD_1.14.0.zip
###
##############################################################################
##############################################################################


  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
 49  476k   49  235k    0     0   774k      0 --:--:-- --:--:-- --:--:--  775k
100  476k  100  476k    0     0  1046k      0 --:--:-- --:--:-- --:--:-- 1046k

install for i386

* installing *source* package 'InTAD' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'InTAD'
    finding HTML links ... done
    InTADSig                                html  
    combineInTAD                            html  
    combineWithLoops                        html  
    enhSel                                  html  
    enhSelGR                                html  
    exprs                                   html  
    filterGeneExpr                          html  
    findCorFromLoops                        html  
    findCorrelation                         html  
    fnSE                                    html  
    geneCoords                              html  
    get.enr.bg.normfit                      html  
    loadSigInTAD                            html  
    loopsDfSel                              html  
    mbAnnData                               html  
    newSigInTAD                             html  
    plotCorAcrossRef                        html  
    plotCorrelation                         html  
    rpkmCountsSel                           html  
    sigCoords                               html  
    signals                                 html  
    tadGR                                   html  
    txsSel                                  html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'InTAD' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'InTAD' as InTAD_1.14.0.zip
* DONE (InTAD)
* installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library'
package 'InTAD' successfully unpacked and MD5 sums checked