############################################################################## ############################################################################## ### ### Running command: ### ### rm -rf INSPEcT.buildbin-libdir && mkdir INSPEcT.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=INSPEcT.buildbin-libdir INSPEcT_1.24.0.tar.gz ### ############################################################################## ############################################################################## install for i386 * installing *source* package 'INSPEcT' ... ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'INSPEcT' finding HTML links ... done AIC-INSPEcT-method html Extract html INSPEcT-class html finding level-2 HTML links ... done INSPEcT-shinyApps html INSPEcT html INSPEcT_diffsteady-class html INSPEcT_model-class html INSPEcT_steadyNoNascent-class html PTratio html PTreg html allcounts html calculateRatePvals html chisqmodel html chisqtest html combine html compareSteady html compareSteadyNoNascent html computeConfidenceIntervals html convergence html correlationPlot html dim-INSPEcT-method html featureNames-INSPEcT-method html featureWidths html geneClass html inHeatmap html inspectFromBAM html inspectFromPCR html labeledSF html libsizes html logLik html makeModelRates html makeOscillatorySimModel html makeSimDataset html makeSimModel html mature html matureVar html modelRates html modelRatesNF html modelSelection html modelingParams html nGenes html nTpts html newINSPEcT html plotGene html plotMA html plotPMgene html plotPMtrend html premature html prematureVar html processingDelay html quantifyExpressionsFromBAMs html quantifyExpressionsFromBWs html quantifyExpressionsFromTrAbundance html quantifyExpressionsFromTrCounts html ratePvals html ratesFirstGuess html ratesFirstGuessVar html removeModel html rocCurve html rocThresholds html setConfidenceIntervals html simData3rep_Nascent html simData3rep_NoNascent html simData4rep_Nascent html simData4rep_NoNascent html split html tpts html viewConfidenceIntervals html viewModelRates html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'INSPEcT' ... ** testing if installed package can be loaded * MD5 sums packaged installation of 'INSPEcT' as INSPEcT_1.24.0.zip * DONE (INSPEcT)