############################################################################## ############################################################################## ### ### Running command: ### ### C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/HiTC_1.38.0.tar.gz && rm -rf HiTC.buildbin-libdir && mkdir HiTC.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=HiTC.buildbin-libdir HiTC_1.38.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL HiTC_1.38.0.zip && rm HiTC_1.38.0.tar.gz HiTC_1.38.0.zip ### ############################################################################## ############################################################################## % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 5 725k 5 42989 0 0 272k 0 0:00:02 --:--:-- 0:00:02 272k 100 725k 100 725k 0 0 590k 0 0:00:01 0:00:01 --:--:-- 590k 100 725k 100 725k 0 0 590k 0 0:00:01 0:00:01 --:--:-- 589k install for i386 * installing *source* package 'HiTC' ... ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'HiTC' finding HTML links ... done CQC html HTCexp-class html HTClist-class html HiTC-internal html Nora_5C html binningC html directionalityIndex html discretize html export.my5C html exportC html extractRegion html getAnnotatedRestrictionSites html getExpectedCounts html getPearsonMap html getRestrictionFragmentsPerChromosome html import.my5C html importC html intervalsDist html mapC html normICE html normLGF html pca.hic html removeIntervals html setGenomicFeatures html setIntervalScale html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'HiTC' ... ** testing if installed package can be loaded * MD5 sums packaged installation of 'HiTC' as HiTC_1.38.0.zip * DONE (HiTC) * installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library' package 'HiTC' successfully unpacked and MD5 sums checked