############################################################################## ############################################################################## ### ### Running command: ### ### rm -rf Glimma.buildbin-libdir && mkdir Glimma.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=Glimma.buildbin-libdir Glimma_2.4.0.tar.gz ### ############################################################################## ############################################################################## install for i386 * installing *source* package 'Glimma' ... ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'Glimma' finding HTML links ... done arraydata html as.hexcol html buildXYData html extractGroups html glBar html glBar.default html glMDPlot.DESeqDataSet html glMDPlot.DESeqResults html glMDPlot.DGEExact html glMDPlot.DGELRT html glMDPlot.MArrayLM html glMDPlot html glMDPlot.default html glMDRmd html glMDSPlot.DESeqDataSet html glMDSPlot.DGEList html glMDSPlot html glMDSPlot.default html glScatter html glScatter.default html glTable html glXYPlot html glimma html glimmaMA.DESeqDataSet html glimmaMA.DGEExact html glimmaMA.DGELRT html glimmaMA.MArrayLM html glimmaMA html finding level-2 HTML links ... done glimmaMDS.DESeqDataSet html glimmaMDS.DGEList html glimmaMDS html glimmaMDS.default html glimmaVolcano.DESeqDataSet html glimmaVolcano.DGEExact html glimmaVolcano.DGELRT html glimmaVolcano.MArrayLM html glimmaVolcano html glimmaXY html glimmaXYWidget html glimma_plot html gllink html gltablink html is.hex html lymphomaRNAseq html makeJson html makeJson.data.frame html makeJson.jschart html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'Glimma' ... ** testing if installed package can be loaded * MD5 sums packaged installation of 'Glimma' as Glimma_2.4.0.zip * DONE (Glimma)