############################################################################## ############################################################################## ### ### Running command: ### ### rm -rf GenomicSuperSignature.buildbin-libdir && mkdir GenomicSuperSignature.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=GenomicSuperSignature.buildbin-libdir GenomicSuperSignature_1.2.1.tar.gz ### ############################################################################## ############################################################################## install for i386 * installing *source* package 'GenomicSuperSignature' ... ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'GenomicSuperSignature' finding HTML links ... done GenomicSignatures-class html GenomicSignatures-methods html PCAGenomicSignatures-class html PCAGenomicSignatures-methods html PCAGenomicSignatures html PCinRAV html annotatePC html annotateRAV html buildAvgLoading html calculateScore html dot-RAVName html dot-calculateSilhouetteWidth html dot-loadingCor html drawWordcloud html droplist html extractPC html findKeywordInRAV html findSignature html findStudiesInCluster html getModel html heatmapTable html makeGeneList html meshTable html miniAllZ html miniRAVmodel html miniTCGA html msigdb_gsea html plotAnnotatedPCA html plotValidate html res_hcut html rmNaInf html rowNorm html run_gsea html sampleScoreHeatmap html subsetEnrichedPathways html subsetGSEA html validate html validatedSignatures html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'GenomicSuperSignature' ... ** testing if installed package can be loaded * MD5 sums packaged installation of 'GenomicSuperSignature' as GenomicSuperSignature_1.2.1.zip * DONE (GenomicSuperSignature)