############################################################################## ############################################################################## ### ### Running command: ### ### C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/GeneTonic_1.6.4.tar.gz && rm -rf GeneTonic.buildbin-libdir && mkdir GeneTonic.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=GeneTonic.buildbin-libdir GeneTonic_1.6.4.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL GeneTonic_1.6.4.zip && rm GeneTonic_1.6.4.tar.gz GeneTonic_1.6.4.zip ### ############################################################################## ############################################################################## % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 25 1835k 25 461k 0 0 728k 0 0:00:02 --:--:-- 0:00:02 728k 100 1835k 100 1835k 0 0 1205k 0 0:00:01 0:00:01 --:--:-- 1206k install for i386 * installing *source* package 'GeneTonic' ... ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'GeneTonic' finding HTML links ... done GeneTonic-pkg html GeneTonic html GeneTonic_list html check_colors html checkup_GeneTonic html checkup_gtl html cluster_markov html create_jaccard_matrix html create_kappa_matrix html describe_gtl html deseqresult2df html distill_enrichment html dot-check_pandoc html enhance_table html enrichment_map html enrichr_output_macrophage html export_for_iSEE html finding level-2 HTML links ... done export_to_sif html fgseaRes html gene_plot html geneinfo_2_html html get_aggrscores html get_expression_values html ggs_backbone html ggs_graph html go_2_html html gostres_macrophage html gs_alluvial html gs_dendro html gs_fuzzyclustering html gs_heatmap html gs_horizon html gs_mds html gs_radar html gs_scores html gs_scoresheat html gs_simplify html gs_summary_heat html gs_summary_overview html gs_summary_overview_pair html gs_volcano html happy_hour html map2color html overlap_coefficient html overlap_jaccard_index html res_macrophage_IFNg_vs_naive html shake_davidResult html shake_enrichResult html shake_enrichrResult html shake_fgseaResult html shake_gprofilerResult html shake_gsenrichResult html shake_topGOtableResult html signature_volcano html styleColorBar_divergent html summarize_ggs_hubgenes html topgoDE_macrophage_IFNg_vs_naive html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'GeneTonic' ... ** testing if installed package can be loaded * MD5 sums packaged installation of 'GeneTonic' as GeneTonic_1.6.4.zip * DONE (GeneTonic) * installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library' package 'GeneTonic' successfully unpacked and MD5 sums checked