############################################################################## ############################################################################## ### ### Running command: ### ### rm -rf GeneRegionScan.buildbin-libdir && mkdir GeneRegionScan.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=GeneRegionScan.buildbin-libdir GeneRegionScan_1.50.0.tar.gz ### ############################################################################## ############################################################################## install for i386 * installing *source* package 'GeneRegionScan' ... ** using staged installation ** R ** data ** exec ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'GeneRegionScan' finding HTML links ... done Nondocumented-objects html ProbeLevelSet-class html addSnpPdata html checkForFileInPath html doProbeLinear html doProbeTTest html exampleProbeLevelSet html excludeDoubleMatchingProbes html exonStructure html findProbePositions html findSequenceInGenome html geneRegionScan html REDIRECT:topic Previous alias or file overwritten by alias: C:/Users/biocbuild/bbs-3.14-bioc/meat/GeneRegionScan.buildbin-libdir/00LOCK-GeneRegionScan/00new/GeneRegionScan/help/GeneRegionScan.html genomic html getLocalMetaprobeIntensities html getLocalProbeIntensities html getMetaprobesetsFromRegionOfInterest html getProbeLevelAnnotationForExonArrays html getProbesetsFromMetaprobeset html getProbesetsFromRegionOfInterest html getSequence html getServerProbeIntensities html mrna html plotCoexpression html plotOnGene html plotStatistics html readGeneInput html translateSampleNames html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'GeneRegionScan' ... ** testing if installed package can be loaded * MD5 sums packaged installation of 'GeneRegionScan' as GeneRegionScan_1.50.0.zip * DONE (GeneRegionScan)