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This page was generated on 2021-10-25 14:06:17 -0400 (Mon, 25 Oct 2021).

BUILD BIN results for GeneBreak on riesling1

To the developers/maintainers of the GeneBreak package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/GeneBreak.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 719/2083HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
GeneBreak 1.23.0  (landing page)
Evert van den Broek
Snapshot Date: 2021-10-24 14:50:04 -0400 (Sun, 24 Oct 2021)
git_url: https://git.bioconductor.org/packages/GeneBreak
git_branch: master
git_last_commit: c48ff88
git_last_commit_date: 2021-05-19 12:16:21 -0400 (Wed, 19 May 2021)
nebbiolo2Linux (Ubuntu 20.04.2 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
riesling1Windows Server 2019 Standard / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
merida1macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published
machv2macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  

Summary

Package: GeneBreak
Version: 1.23.0
Command: rm -rf GeneBreak.buildbin-libdir && mkdir GeneBreak.buildbin-libdir && D:\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=GeneBreak.buildbin-libdir GeneBreak_1.23.0.tar.gz
StartedAt: 2021-10-25 05:37:55 -0400 (Mon, 25 Oct 2021)
EndedAt: 2021-10-25 05:42:09 -0400 (Mon, 25 Oct 2021)
EllapsedTime: 254.0 seconds
RetCode: 0
Status:   OK  
PackageFile: GeneBreak_1.23.0.zip
PackageFileSize: 4.53 MiB

Command output

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###
### Running command:
###
###   rm -rf GeneBreak.buildbin-libdir && mkdir GeneBreak.buildbin-libdir && D:\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=GeneBreak.buildbin-libdir GeneBreak_1.23.0.tar.gz
###
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install for i386

* installing *source* package 'GeneBreak' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
Creating a new generic function for 'segmentData' in package 'GeneBreak'
** help
*** installing help indices
  converting help for package 'GeneBreak'
    finding HTML links ... done
    CopyNumberBreakPointGenes-class         html  
    CopyNumberBreakPoints-class             html  
    GeneBreak                               html  
    accessOptions-CopyNumberBreakPoints-method
                                            html  
    addGeneAnnotation-CopyNumberBreakPoints-method
                                            html  
    bpFilter-CopyNumberBreakPoints-method   html  
    bpGenes-CopyNumberBreakPointGenes-method
                                            html  
    bpPlot-CopyNumberBreakPoints-method     html  
    bpStats-CopyNumberBreakPoints-method    html  
    breakpointData-CopyNumberBreakPoints-method
                                            html  
    breakpointsPerGene-CopyNumberBreakPointGenes-method
                                            html  
    callData-CopyNumberBreakPoints-method   html  
    copynumber.data.chr18                   html  
    copynumber.data.chr20                   html  
    copynumber.data.chr21                   html  
    ens.gene.ann.hg18                       html  
    ens.gene.ann.hg19                       html  
    ens.gene.ann.hg38                       html  
    featureChromosomes-CopyNumberBreakPoints-method
                                            html  
    featureInfo-CopyNumberBreakPoints-method
                                            html  
    featuresPerGene-CopyNumberBreakPointGenes-method
                                            html  
    geneChromosomes-CopyNumberBreakPointGenes-method
                                            html  
    geneInfo-CopyNumberBreakPointGenes-method
                                            html  
    getBreakpoints                          html  
    namesFeatures-CopyNumberBreakPoints-method
                                            html  
    recurrentGenes-CopyNumberBreakPointGenes-method
                                            html  
    sampleNames-CopyNumberBreakPoints-method
                                            html  
    segmentData-CopyNumberBreakPoints-method
                                            html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'GeneBreak' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'GeneBreak' as GeneBreak_1.23.0.zip
* DONE (GeneBreak)