############################################################################## ############################################################################## ### ### Running command: ### ### C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/FindIT2_1.0.3.tar.gz && rm -rf FindIT2.buildbin-libdir && mkdir FindIT2.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=FindIT2.buildbin-libdir FindIT2_1.0.3.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL FindIT2_1.0.3.zip && rm FindIT2_1.0.3.tar.gz FindIT2_1.0.3.zip ### ############################################################################## ############################################################################## % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 24 798k 24 194k 0 0 639k 0 0:00:01 --:--:-- 0:00:01 639k 100 798k 100 798k 0 0 916k 0 --:--:-- --:--:-- --:--:-- 916k install for i386 * installing *source* package 'FindIT2' ... ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'FindIT2' finding HTML links ... done ATAC_normCount html RNADiff_LEC2_GR html RNA_normCount html TF_target_database html calcRP_TFHit html calcRP_coverage html calcRP_region html enhancerPromoterCor html findIT_MARA html findIT_TFHit html findIT_TTPair html findIT_enrichFisher html findIT_enrichWilcox html findIT_regionRP html getAssocPairNumber html integrate_ChIP_RNA html integrate_replicates html jaccard_findIT_TTpair html jaccard_findIT_enrichFisher html loadPeakFile html mm_geneBound html mm_geneScan html mm_nearestGene html peakGeneCor html plot_annoDistance html plot_peakGeneAlias_summary html plot_peakGeneCor html test_featureSet html test_geneSet html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'FindIT2' ... ** testing if installed package can be loaded * MD5 sums packaged installation of 'FindIT2' as FindIT2_1.0.3.zip * DONE (FindIT2) * installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library' package 'FindIT2' successfully unpacked and MD5 sums checked