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### Running command:
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###   C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD check --force-multiarch --install=check:EWCE.install-out.txt --library=C:\Users\biocbuild\bbs-3.14-bioc\R\library --no-vignettes --timings EWCE_1.2.0.tar.gz
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* using log directory 'C:/Users/biocbuild/bbs-3.14-bioc/meat/EWCE.Rcheck'
* using R version 4.1.3 (2022-03-10)
* using platform: x86_64-w64-mingw32 (64-bit)
* using session charset: ISO8859-1
* using option '--no-vignettes'
* checking for file 'EWCE/DESCRIPTION' ... OK
* checking extension type ... Package
* this is package 'EWCE' version '1.2.0'
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking whether package 'EWCE' can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking 'build' directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* loading checks for arch 'i386'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
* loading checks for arch 'x64'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking files in 'vignettes' ... OK
* checking examples ...
** running examples for arch 'i386' ... OK
Examples with CPU (user + system) or elapsed time > 5s
                                   user system elapsed
generate_bootstrap_plots          26.50   2.09   30.21
ewce_expression_data              24.89   0.89   27.44
bootstrap_enrichment_test         19.56   0.59   21.51
controlled_geneset_enrichment     19.31   0.58   21.14
ewce_plot                         19.14   0.65   21.01
check_ewce_genelist_inputs        18.47   0.58   20.11
add_res_to_merging_list           15.03   2.01   21.74
fix_bad_mgi_symbols               12.45   0.54   13.63
filter_genes_without_1to1_homolog  8.61   0.27    9.24
bin_columns_into_quantiles         6.89   0.36    7.41
bin_specificity_into_quantiles     6.89   0.33    7.52
prep_dendro                        6.56   0.51    7.26
drop_uninformative_genes           6.05   0.33    6.88
generate_celltype_data             5.60   0.26    6.18
get_celltype_table                 5.14   0.43    5.75
** running examples for arch 'x64' ... OK
Examples with CPU (user + system) or elapsed time > 5s
                                   user system elapsed
generate_bootstrap_plots          29.72   0.86   32.42
ewce_expression_data              25.95   0.83   29.11
check_ewce_genelist_inputs        21.30   0.56   23.15
controlled_geneset_enrichment     20.31   0.56   21.94
bootstrap_enrichment_test         19.31   0.52   22.63
ewce_plot                         19.02   0.60   20.77
add_res_to_merging_list           12.45   1.41   15.22
fix_bad_mgi_symbols               11.61   0.58   12.75
filter_genes_without_1to1_homolog  8.23   0.53    9.14
bin_columns_into_quantiles         7.46   0.17    7.83
bin_specificity_into_quantiles     7.43   0.17    7.89
prep_dendro                        6.57   0.10    7.25
generate_celltype_data             5.63   0.20    6.00
drop_uninformative_genes           5.50   0.25    6.03
get_celltype_table                 5.22   0.43    5.83
* checking for unstated dependencies in 'tests' ... OK
* checking tests ...
** running tests for arch 'i386' ...
  Running 'testthat.R'
 OK
** running tests for arch 'x64' ...
  Running 'testthat.R'
 OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes in 'inst/doc' ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignette outputs ... SKIPPED
* checking PDF version of manual ... OK
* DONE

Status: OK