Hendrik Treutler
| Snapshot Date: 2022-04-12 01:55:07 -0400 (Tue, 12 Apr 2022) |
| git_url: https://git.bioconductor.org/packages/DiffLogo |
| git_branch: RELEASE_3_14 |
| git_last_commit: 8ac0955 |
| git_last_commit_date: 2021-10-26 12:22:35 -0400 (Tue, 26 Oct 2021) |
| Back to Multiple platform build/check report for BioC 3.14 |
|
This page was generated on 2022-04-13 12:06:27 -0400 (Wed, 13 Apr 2022).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo2 | Linux (Ubuntu 20.04.4 LTS) | x86_64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4324 |
| tokay2 | Windows Server 2012 R2 Standard | x64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4077 |
| machv2 | macOS 10.14.6 Mojave | x86_64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4137 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
|
To the developers/maintainers of the DiffLogo package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/DiffLogo.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 508/2083 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| DiffLogo 2.18.0 (landing page) Hendrik Treutler
| nebbiolo2 | Linux (Ubuntu 20.04.4 LTS) / x86_64 | OK | OK | WARNINGS | | ||||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | WARNINGS | OK | | ||||||||
| machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | WARNINGS | OK | | ||||||||
| Package: DiffLogo |
| Version: 2.18.0 |
| Command: C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/DiffLogo_2.18.0.tar.gz && rm -rf DiffLogo.buildbin-libdir && mkdir DiffLogo.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=DiffLogo.buildbin-libdir DiffLogo_2.18.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL DiffLogo_2.18.0.zip && rm DiffLogo_2.18.0.tar.gz DiffLogo_2.18.0.zip |
| StartedAt: 2022-04-12 04:10:14 -0400 (Tue, 12 Apr 2022) |
| EndedAt: 2022-04-12 04:11:34 -0400 (Tue, 12 Apr 2022) |
| EllapsedTime: 80.6 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/DiffLogo_2.18.0.tar.gz && rm -rf DiffLogo.buildbin-libdir && mkdir DiffLogo.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=DiffLogo.buildbin-libdir DiffLogo_2.18.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL DiffLogo_2.18.0.zip && rm DiffLogo_2.18.0.tar.gz DiffLogo_2.18.0.zip
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install for i386
* installing *source* package 'DiffLogo' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'DiffLogo'
finding HTML links ... done
ASN html
Alphabet html
DNA html
FULL_ALPHABET html
RNA html
alignPwmSets html
baseDistributionPwm html
calculatePvalue html
createDiffLogoObject html
diffLogo html
diffLogoFromPwm html
diffLogoTable html
diffLogoTableConfiguration html
differenceOfICs html
drawDiffLogoTable html
enrichDiffLogoObjectWithPvalues html
enrichDiffLogoTableWithPvalues html
extendPwmsFromAlignmentVector html
getAlphabetFromCharacters html
getAlphabetFromSequences html
getPwmFromAlignment html
getPwmFromAlignmentFile html
getPwmFromFastaFile html
getPwmFromFile html
getPwmFromHomerFile html
getPwmFromPfmOrJasparFile html
getPwmFromPwmFile html
getSequencesFromAlignmentFile html
getSequencesFromFastaFile html
informationContent html
localPwmAlignment html
lossOfAbsICDifferences html
multipleLocalPwmsAlignment html
normalizePWM html
normalizedDifferenceOfProbabilities html
prepareDiffLogoTable html
probabilities html
pwmDivergence html
pwmsDistanceMatrix html
reverseAlignmentVector html
seqLogo html
shannonDivergence html
sumOfAbsICDifferences html
sumOfAbsProbabilityDifferences html
sumProbabilities html
switchDirection html
twoSetsAveragePwmDivergenceFromAlignmentVector
html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'DiffLogo' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'DiffLogo' as DiffLogo_2.18.0.zip
* DONE (DiffLogo)
* installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library'
package 'DiffLogo' successfully unpacked and MD5 sums checked