############################################################################## ############################################################################## ### ### Running command: ### ### C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/DAMEfinder_1.6.0.tar.gz && rm -rf DAMEfinder.buildbin-libdir && mkdir DAMEfinder.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=DAMEfinder.buildbin-libdir DAMEfinder_1.6.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL DAMEfinder_1.6.0.zip && rm DAMEfinder_1.6.0.tar.gz DAMEfinder_1.6.0.zip ### ############################################################################## ############################################################################## % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 4 2643k 4 118k 0 0 447k 0 0:00:05 --:--:-- 0:00:05 446k 48 2643k 48 1275k 0 0 1011k 0 0:00:02 0:00:01 0:00:01 1011k 100 2643k 100 2643k 0 0 1346k 0 0:00:01 0:00:01 --:--:-- 1346k install for i386 * installing *source* package 'DAMEfinder' ... ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'DAMEfinder' finding HTML links ... done DAMEfinder html calc_asm html calc_derivedasm html finding level-2 HTML links ... done calc_logodds html calc_score html calc_weight html dame_track html dame_track_mean html empirical_pval html extract_bams html extractbams_output html find_dames html getMD html get_tstats html methyl_MDS_plot html methyl_circle_plot html methyl_circle_plotCpG html modulus_sqrt html read_tuples html readtuples_output html simes_pval html splitReads html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'DAMEfinder' ... ** testing if installed package can be loaded * MD5 sums packaged installation of 'DAMEfinder' as DAMEfinder_1.6.0.zip * DONE (DAMEfinder) * installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library' package 'DAMEfinder' successfully unpacked and MD5 sums checked