##############################################################################
##############################################################################
###
### Running command:
###
###   chmod a+r CountClust -R && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data CountClust
###
##############################################################################
##############################################################################


* checking for file 'CountClust/DESCRIPTION' ... OK
* preparing 'CountClust':
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building 'count-clust.Rmd' using rmarkdown
Loading required package: usethis
Downloading GitHub repo TaddyLab/maptpx@HEAD
Installing package into 'C:/Users/biocbuild/bbs-3.14-bioc/tmpdir/Rtmpkb3B6A/Rinstdeccc77e3d'
(as 'lib' is unspecified)
* installing *source* package 'maptpx' ...
** using staged installation
** libs

*** arch - i386
"C:/rtools40/mingw32/bin/"gcc  -I"C:/Users/BIOCBU~1/BBS-3~1.14-/R/include" -DNDEBUG     -I"C:/extsoft/include"  -DRPRINT    -O2 -Wall  -std=gnu99 -mfpmath=sse -msse2 -mstackrealign  -c init.c -o init.o
"C:/rtools40/mingw32/bin/"gcc  -I"C:/Users/BIOCBU~1/BBS-3~1.14-/R/include" -DNDEBUG     -I"C:/extsoft/include"  -DRPRINT    -O2 -Wall  -std=gnu99 -mfpmath=sse -msse2 -mstackrealign  -c latools.c -o latools.o
"C:/rtools40/mingw32/bin/"gcc  -I"C:/Users/BIOCBU~1/BBS-3~1.14-/R/include" -DNDEBUG     -I"C:/extsoft/include"  -DRPRINT    -O2 -Wall  -std=gnu99 -mfpmath=sse -msse2 -mstackrealign  -c rhelp.c -o rhelp.o
"C:/rtools40/mingw32/bin/"gcc  -I"C:/Users/BIOCBU~1/BBS-3~1.14-/R/include" -DNDEBUG     -I"C:/extsoft/include"  -DRPRINT    -O2 -Wall  -std=gnu99 -mfpmath=sse -msse2 -mstackrealign  -c topics.c -o topics.o
C:/rtools40/mingw32/bin/gcc -shared -s -static-libgcc -o maptpx.dll tmp.def init.o latools.o rhelp.o topics.o -LC:/Users/BIOCBU~1/BBS-3~1.14-/R/bin/i386 -lRlapack -LC:/Users/BIOCBU~1/BBS-3~1.14-/R/bin/i386 -lRblas -lgfortran -lm -lquadmath -LC:/extsoft/lib/i386 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.14-/R/bin/i386 -lR
installing to C:/Users/biocbuild/bbs-3.14-bioc/tmpdir/Rtmpkb3B6A/Rinstdeccc77e3d/00LOCK-maptpx/00new/maptpx/libs/i386

*** arch - x64
"C:/rtools40/mingw64/bin/"gcc  -I"C:/Users/BIOCBU~1/BBS-3~1.14-/R/include" -DNDEBUG     -I"C:/extsoft/include"  -DRPRINT    -O2 -Wall  -std=gnu99 -mfpmath=sse -msse2 -mstackrealign  -c init.c -o init.o
"C:/rtools40/mingw64/bin/"gcc  -I"C:/Users/BIOCBU~1/BBS-3~1.14-/R/include" -DNDEBUG     -I"C:/extsoft/include"  -DRPRINT    -O2 -Wall  -std=gnu99 -mfpmath=sse -msse2 -mstackrealign  -c latools.c -o latools.o
"C:/rtools40/mingw64/bin/"gcc  -I"C:/Users/BIOCBU~1/BBS-3~1.14-/R/include" -DNDEBUG     -I"C:/extsoft/include"  -DRPRINT    -O2 -Wall  -std=gnu99 -mfpmath=sse -msse2 -mstackrealign  -c rhelp.c -o rhelp.o
"C:/rtools40/mingw64/bin/"gcc  -I"C:/Users/BIOCBU~1/BBS-3~1.14-/R/include" -DNDEBUG     -I"C:/extsoft/include"  -DRPRINT    -O2 -Wall  -std=gnu99 -mfpmath=sse -msse2 -mstackrealign  -c topics.c -o topics.o
C:/rtools40/mingw64/bin/gcc -shared -s -static-libgcc -o maptpx.dll tmp.def init.o latools.o rhelp.o topics.o -LC:/Users/BIOCBU~1/BBS-3~1.14-/R/bin/x64 -lRlapack -LC:/Users/BIOCBU~1/BBS-3~1.14-/R/bin/x64 -lRblas -lgfortran -lm -lquadmath -LC:/extsoft/lib/x64 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.14-/R/bin/x64 -lR
installing to C:/Users/biocbuild/bbs-3.14-bioc/tmpdir/Rtmpkb3B6A/Rinstdeccc77e3d/00LOCK-maptpx/00new/maptpx/libs/x64
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'maptpx'
    finding HTML links ... done
    counts                                  html  
    predict.topics                          html  
    rdir                                    html  
    topicVar                                html  
    topics                                  html  
** building package indices
** testing if installed package can be loaded from temporary location
*** arch - i386
*** arch - x64
** testing if installed package can be loaded from final location
*** arch - i386
*** arch - x64
** testing if installed package keeps a record of temporary installation path
* DONE (maptpx)
Loading required package: ggplot2
Warning in download.file("https://cdn.rawgit.com/kkdey/GTExV6Brain/master/data/GTExV6Brain.rda",  :
  cannot open URL 'https://cdn.rawgit.com/kkdey/GTExV6Brain/master/data/GTExV6Brain.rda': HTTP status was '403 Forbidden'
Quitting from lines 118-130 (count-clust.Rmd) 
Error: processing vignette 'count-clust.Rmd' failed with diagnostics:
cannot open URL 'https://cdn.rawgit.com/kkdey/GTExV6Brain/master/data/GTExV6Brain.rda'
--- failed re-building 'count-clust.Rmd'

SUMMARY: processing the following file failed:
  'count-clust.Rmd'

Error: Vignette re-building failed.
Execution halted