############################################################################## ############################################################################## ### ### Running command: ### ### C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/CoRegNet_1.32.0.tar.gz && rm -rf CoRegNet.buildbin-libdir && mkdir CoRegNet.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=CoRegNet.buildbin-libdir CoRegNet_1.32.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL CoRegNet_1.32.0.zip && rm CoRegNet_1.32.0.tar.gz CoRegNet_1.32.0.zip ### ############################################################################## ############################################################################## % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 5 4983k 5 264k 0 0 880k 0 0:00:05 --:--:-- 0:00:05 879k 32 4983k 32 1621k 0 0 1251k 0 0:00:03 0:00:01 0:00:02 1252k 69 4983k 69 3486k 0 0 1522k 0 0:00:03 0:00:02 0:00:01 1522k 100 4983k 100 4983k 0 0 1751k 0 0:00:02 0:00:02 --:--:-- 1752k install for i386 * installing *source* package 'CoRegNet' ... ** using staged installation ** libs "C:/rtools40/mingw32/bin/"gcc -I"C:/Users/BIOCBU~1/BBS-3~1.14-/R/include" -DNDEBUG -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -c comblicorn.c -o comblicorn.o C:/rtools40/mingw32/bin/gcc -shared -s -static-libgcc -o CoRegNet.dll tmp.def comblicorn.o -LC:/extsoft/lib/i386 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.14-/R/bin/i386 -lR installing to C:/Users/biocbuild/bbs-3.14-bioc/meat/CoRegNet.buildbin-libdir/00LOCK-CoRegNet/00new/CoRegNet/libs/i386 ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'CoRegNet' finding HTML links ... done CoRegNet-class html HumanDataExamples html HumanTF html addEvidences html coRegnet-package html coregnet html REDIRECT:topic Previous alias or file overwritten by alias: C:/Users/biocbuild/bbs-3.14-bioc/meat/CoRegNet.buildbin-libdir/00LOCK-CoRegNet/00new/CoRegNet/help/coregnet.html coregulators html discretizeExpressionData html display html hLICORN html masterRegulator html refine html regulatorInfluence html regulators html summary html REDIRECT:topic Previous alias or file overwritten by alias: C:/Users/biocbuild/bbs-3.14-bioc/meat/CoRegNet.buildbin-libdir/00LOCK-CoRegNet/00new/CoRegNet/help/coregnetToList.coregnet.html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'CoRegNet' ... ** libs "C:/rtools40/mingw64/bin/"gcc -I"C:/Users/BIOCBU~1/BBS-3~1.14-/R/include" -DNDEBUG -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -c comblicorn.c -o comblicorn.o C:/rtools40/mingw64/bin/gcc -shared -s -static-libgcc -o CoRegNet.dll tmp.def comblicorn.o -LC:/extsoft/lib/x64 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.14-/R/bin/x64 -lR installing to C:/Users/biocbuild/bbs-3.14-bioc/meat/CoRegNet.buildbin-libdir/CoRegNet/libs/x64 ** testing if installed package can be loaded * MD5 sums packaged installation of 'CoRegNet' as CoRegNet_1.32.0.zip * DONE (CoRegNet) * installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library' package 'CoRegNet' successfully unpacked and MD5 sums checked