############################################################################## ############################################################################## ### ### Running command: ### ### C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/Chicago_1.22.0.tar.gz && rm -rf Chicago.buildbin-libdir && mkdir Chicago.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=Chicago.buildbin-libdir Chicago_1.22.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL Chicago_1.22.0.zip && rm Chicago_1.22.0.tar.gz Chicago_1.22.0.zip ### ############################################################################## ############################################################################## % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 78 433k 78 341k 0 0 534k 0 --:--:-- --:--:-- --:--:-- 534k 100 433k 100 433k 0 0 607k 0 --:--:-- --:--:-- --:--:-- 607k install for i386 * installing *source* package 'Chicago' ... ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'Chicago' finding HTML links ... done Chicago-package html cdUnitTest html chicagoData html chicagoPipeline html copyCD html defaultSettings html estimateBrownianComponent html estimateDistFun html estimateTechnicalNoise html exportResults html getPvals html getScores html getSkOnly html mergeSamples html modifySettings html normaliseBaits html normaliseOtherEnds html overlapFragWithFeatures html finding level-2 HTML links ... done peakEnrichment4Features html plotBaits html plotDistFun html readAndMerge html readSample html setExperiment html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'Chicago' ... ** testing if installed package can be loaded * MD5 sums packaged installation of 'Chicago' as Chicago_1.22.0.zip * DONE (Chicago) * installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library' package 'Chicago' successfully unpacked and MD5 sums checked