Back to Multiple platform build/check report for BioC 3.14
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This page was generated on 2022-04-13 12:06:17 -0400 (Wed, 13 Apr 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 20.04.4 LTS)x86_644.1.3 (2022-03-10) -- "One Push-Up" 4324
tokay2Windows Server 2012 R2 Standardx644.1.3 (2022-03-10) -- "One Push-Up" 4077
machv2macOS 10.14.6 Mojavex86_644.1.3 (2022-03-10) -- "One Push-Up" 4137
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

BUILD BIN results for CancerSubtypes on tokay2


To the developers/maintainers of the CancerSubtypes package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/CancerSubtypes.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 243/2083HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
CancerSubtypes 1.20.0  (landing page)
Taosheng Xu
Snapshot Date: 2022-04-12 01:55:07 -0400 (Tue, 12 Apr 2022)
git_url: https://git.bioconductor.org/packages/CancerSubtypes
git_branch: RELEASE_3_14
git_last_commit: 1980bae
git_last_commit_date: 2021-10-26 12:29:33 -0400 (Tue, 26 Oct 2021)
nebbiolo2Linux (Ubuntu 20.04.4 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
tokay2Windows Server 2012 R2 Standard / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
machv2macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published

Summary

Package: CancerSubtypes
Version: 1.20.0
Command: rm -rf CancerSubtypes.buildbin-libdir && mkdir CancerSubtypes.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=CancerSubtypes.buildbin-libdir CancerSubtypes_1.20.0.tar.gz
StartedAt: 2022-04-13 05:46:35 -0400 (Wed, 13 Apr 2022)
EndedAt: 2022-04-13 05:47:09 -0400 (Wed, 13 Apr 2022)
EllapsedTime: 33.4 seconds
RetCode: 0
Status:   OK  
PackageFile: CancerSubtypes_1.20.0.zip
PackageFileSize: 1.751 MiB

Command output

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###
### Running command:
###
###   rm -rf CancerSubtypes.buildbin-libdir && mkdir CancerSubtypes.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=CancerSubtypes.buildbin-libdir CancerSubtypes_1.20.0.tar.gz
###
##############################################################################
##############################################################################



install for i386

* installing *source* package 'CancerSubtypes' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'CancerSubtypes'
    finding HTML links ... done
    DiffExp.limma                           html  
    ExecuteCC                               html  
    ExecuteCNMF                             html  
    finding level-2 HTML links ... done

    ExecuteSNF.CC                           html  
    ExecuteSNF                              html  
    ExecuteWSNF                             html  
    ExecuteiCluster                         html  
    FSbyCox                                 html  
    FSbyMAD                                 html  
    FSbyPCA                                 html  
    FSbyVar                                 html  
    GeneExp                                 html  
    Ranking                                 html  
    affinityMatrix                          html  
    data.checkDistribution                  html  
    data.imputation                         html  
    data.normalization                      html  
    dist2                                   html  
    drawHeatmap                             html  
    miRNAExp                                html  
    saveFigure                              html  
    sigclustTest                            html  
    silhouette_SimilarityMatrix             html  
    spectralAlg                             html  
    status                                  html  
    survAnalysis                            html  
    time                                    html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'CancerSubtypes' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'CancerSubtypes' as CancerSubtypes_1.20.0.zip
* DONE (CancerSubtypes)