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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/CNVfilteR_1.8.0.tar.gz && rm -rf CNVfilteR.buildbin-libdir && mkdir CNVfilteR.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=CNVfilteR.buildbin-libdir CNVfilteR_1.8.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL CNVfilteR_1.8.0.zip && rm CNVfilteR_1.8.0.tar.gz CNVfilteR_1.8.0.zip
###
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  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
100  197k  100  197k    0     0   864k      0 --:--:-- --:--:-- --:--:--  868k

install for i386

* installing *source* package 'CNVfilteR' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'CNVfilteR'
    finding HTML links ... done
    auxAddCNcolumn                          html  
    auxGetVcfSource                         html  
    auxProcessVariants                      html  
    filterCNVs                              html  
    getVariantScore                         html  
    loadCNVcalls                            html  
    loadSNPsFromVCF                         html  
    loadVCFs                                html  
    plotAllCNVs                             html  
    plotScoringModel                        html  
    plotVariantsForCNV                      html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'CNVfilteR' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'CNVfilteR' as CNVfilteR_1.8.0.zip
* DONE (CNVfilteR)
* installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library'
package 'CNVfilteR' successfully unpacked and MD5 sums checked