############################################################################## ############################################################################## ### ### Running command: ### ### C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/CMA_1.52.0.tar.gz && rm -rf CMA.buildbin-libdir && mkdir CMA.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=CMA.buildbin-libdir CMA_1.52.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL CMA_1.52.0.zip && rm CMA_1.52.0.tar.gz CMA_1.52.0.zip ### ############################################################################## ############################################################################## % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 100 819k 100 819k 0 0 877k 0 --:--:-- --:--:-- --:--:-- 877k install for i386 * installing *source* package 'CMA' ... ** using staged installation ** R ** data ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'CMA' finding HTML links ... done CMA-package html ElasticNetCMA-methods html ElasticNetCMA html GeneSelection-methods html GeneSelection html GenerateLearningsets html LassoCMA-methods html LassoCMA html Planarplot-methods html Planarplot html best html boxplot html classification-methods html classification html cloutput-class html clvarseloutput-class html compBoostCMA-methods html compBoostCMA html compare-methods html compare html dldaCMA-methods html dldaCMA html evaloutput-class html evaluation-methods html evaluation html fdaCMA-methods html fdaCMA html filter html flexdaCMA-methods html flexdaCMA html ftable html gbmCMA-methods html gbmCMA html genesel-class html golub html internals html join-methods html join html khan html knnCMA-methods html knnCMA html ldaCMA-methods html ldaCMA html learningsets-class html nnetCMA-methods html nnetCMA html obsinfo html pknnCMA-methods html pknnCMA html plot,cloutput-method html plot,genesel-method html plot,tuningresult-method html plrCMA-methods html plrCMA html pls_ldaCMA-methods html pls_ldaCMA html pls_lrCMA-methods html pls_lrCMA html pls_rfCMA-methods html pls_rfCMA html pnnCMA-methods html pnnCMA html prediction-methods html prediction html predoutput-class html qdaCMA-methods html qdaCMA html rfCMA-methods html rfCMA html roc html scdaCMA-methods html scdaCMA html shrinkldaCMA-methods html shrinkldaCMA html summary html svmCMA-methods html svmCMA html toplist html tune-methods html tune html tuningresult-class html varseloutput-class html weighted_mcr-methods html weighted_mcr html wmc-methods html wmc html wmcr_result-class html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'CMA' ... ** testing if installed package can be loaded * MD5 sums packaged installation of 'CMA' as CMA_1.52.0.zip * DONE (CMA) * installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library' package 'CMA' successfully unpacked and MD5 sums checked