############################################################################## ############################################################################## ### ### Running command: ### ### C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/BioNERO_1.2.0.tar.gz && rm -rf BioNERO.buildbin-libdir && mkdir BioNERO.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=BioNERO.buildbin-libdir BioNERO_1.2.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL BioNERO_1.2.0.zip && rm BioNERO_1.2.0.tar.gz BioNERO_1.2.0.zip ### ############################################################################## ############################################################################## % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 26 2496k 26 659k 0 0 1443k 0 0:00:01 --:--:-- 0:00:01 1442k 100 2496k 100 2496k 0 0 2227k 0 0:00:01 0:00:01 --:--:-- 2228k install for i386 * installing *source* package 'BioNERO' ... ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'BioNERO' finding HTML links ... done PC_correction html SFT_fit html ZKfiltering html check_SFT html consensus_SFT_fit html consensus_modules html consensus_trait_cor html cormat_to_edgelist html detect_communities html dfs2one html enrichment_analysis html exp2gcn html exp2grn html exp_genes2orthogroups html exp_preprocess html filt.se html filter_by_variance html gene_significance html get_HK html get_edge_list html get_hubs_gcn html get_hubs_grn html get_neighbors html grn_average_rank html grn_combined html grn_filter html grn_infer html is_singleton html modPres_WGCNA html modPres_netrep html module_enrichment html module_preservation html module_stability html module_trait_cor html net_stats html og.zma.osa html osa.se html parse_orthofinder html plot_PCA html plot_dendro_and_colors html plot_dendro_and_cons_colors html plot_eigengene_network html plot_expression_profile html plot_gcn html plot_grn html plot_heatmap html plot_ngenes_per_module html plot_ppi html q_normalize html remove_nonexp html replace_na html zma.interpro html zma.se html zma.tfs html *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'BioNERO' ... ** testing if installed package can be loaded * MD5 sums packaged installation of 'BioNERO' as BioNERO_1.2.0.zip * DONE (BioNERO) * installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library' package 'BioNERO' successfully unpacked and MD5 sums checked