############################################################################## ############################################################################## ### ### Running command: ### ### C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/Basic4Cseq_1.30.0.tar.gz && rm -rf Basic4Cseq.buildbin-libdir && mkdir Basic4Cseq.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=Basic4Cseq.buildbin-libdir Basic4Cseq_1.30.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL Basic4Cseq_1.30.0.zip && rm Basic4Cseq_1.30.0.tar.gz Basic4Cseq_1.30.0.zip ### ############################################################################## ############################################################################## % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 57 219k 57 126k 0 0 475k 0 --:--:-- --:--:-- --:--:-- 475k 100 219k 100 219k 0 0 582k 0 --:--:-- --:--:-- --:--:-- 582k install for i386 * installing *source* package 'Basic4Cseq' ... ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'Basic4Cseq' finding HTML links ... done Data4Cseq-class html Data4Cseq html checkRestrictionEnzymeSequence html chooseNearCisFragments html createVirtualFragmentLibrary html drawDigestionFragmentHistogram html drawHeatmap html exportVisualizationFragmentData html getReadDistribution html giveEnzymeSequence html importVisualizationFragmentData html liverData html liverDataRaw html normalizeFragmentData html plotTransInteractions html prepare4CseqData html printBEDFragmentLibrary html printWigFile html readPointsOfInterestFile html readsToFragments html simulateDigestion html visualizeViewpoint html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'Basic4Cseq' ... ** testing if installed package can be loaded * MD5 sums packaged installation of 'Basic4Cseq' as Basic4Cseq_1.30.0.zip * DONE (Basic4Cseq) * installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library' package 'Basic4Cseq' successfully unpacked and MD5 sums checked