############################################################################## ############################################################################## ### ### Running command: ### ### C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/ALDEx2_1.26.0.tar.gz && rm -rf ALDEx2.buildbin-libdir && mkdir ALDEx2.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=ALDEx2.buildbin-libdir ALDEx2_1.26.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL ALDEx2_1.26.0.zip && rm ALDEx2_1.26.0.tar.gz ALDEx2_1.26.0.zip ### ############################################################################## ############################################################################## % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 7 1109k 7 83487 0 0 355k 0 0:00:03 --:--:-- 0:00:03 356k 95 1109k 95 1055k 0 0 859k 0 0:00:01 0:00:01 --:--:-- 859k 100 1109k 100 1109k 0 0 877k 0 0:00:01 0:00:01 --:--:-- 877k install for i386 * installing *source* package 'ALDEx2' ... ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'ALDEx2' finding HTML links ... done ALDEx2m-package html aldex html aldex.clr-class html aldex.clr.function-methods html aldex.corr html aldex.effect html aldex.glm html aldex.glm.effect html aldex.kw html aldex.plotFeature html aldex.set.mode html aldex.ttest html expectedDistance html getDenom-method html getDirichletInstances-method html getDirichletReplicate-method html getDirichletSample-method html getFeatureNames-method html getFeatures-method html getMonteCarloInstances-method html getMonteCarloReplicate-method html getMonteCarloSample-method html getReads-method html getSampleIDs-method html numConditions-method html numFeatures-method html numMCInstances-method html plot.aldex html selex html synth2 html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'ALDEx2' ... ** testing if installed package can be loaded * MD5 sums packaged installation of 'ALDEx2' as ALDEx2_1.26.0.zip * DONE (ALDEx2) * installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library' package 'ALDEx2' successfully unpacked and MD5 sums checked