Back to Multiple platform build/check report for BioC 3.13 experimental data |
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This page was generated on 2021-01-11 15:59:33 -0500 (Mon, 11 Jan 2021).
TO THE DEVELOPERS/MAINTAINERS OF THE seventyGeneData PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page. |
Package 330/385 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | ||||||
seventyGeneData 1.27.0 Luigi Marchionni
| malbec2 | Linux (Ubuntu 20.04.1 LTS) / x86_64 | OK | OK | OK | ![]() | |||||
riesling1 | Windows Server 2019 Standard / x64 | OK | OK | [ OK ] |
Package: seventyGeneData |
Version: 1.27.0 |
Command: D:\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD check --force-multiarch --install=check:seventyGeneData.install-out.txt --library=D:\biocbuild\bbs-3.13-bioc\R\library --no-vignettes --timings seventyGeneData_1.27.0.tar.gz |
StartedAt: 2021-01-11 11:46:28 -0500 (Mon, 11 Jan 2021) |
EndedAt: 2021-01-11 11:47:14 -0500 (Mon, 11 Jan 2021) |
EllapsedTime: 46.2 seconds |
RetCode: 0 |
Status: OK |
CheckDir: seventyGeneData.Rcheck |
Warnings: 0 |
############################################################################## ############################################################################## ### ### Running command: ### ### D:\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD check --force-multiarch --install=check:seventyGeneData.install-out.txt --library=D:\biocbuild\bbs-3.13-bioc\R\library --no-vignettes --timings seventyGeneData_1.27.0.tar.gz ### ############################################################################## ############################################################################## * using log directory 'D:/biocbuild/bbs-3.13-data-experiment/meat/seventyGeneData.Rcheck' * using R Under development (unstable) (2020-12-30 r79736) * using platform: x86_64-w64-mingw32 (64-bit) * using session charset: ISO8859-1 * using option '--no-vignettes' * checking for file 'seventyGeneData/DESCRIPTION' ... OK * checking extension type ... Package * this is package 'seventyGeneData' version '1.27.0' * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking whether package 'seventyGeneData' can be installed ... OK * checking installed package size ... NOTE installed size is 148.2Mb sub-directories of 1Mb or more: data 55.5Mb extdata 92.7Mb * checking package directory ... OK * checking 'build' directory ... OK * checking DESCRIPTION meta-information ... NOTE Malformed Description field: should contain one or more complete sentences. * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * loading checks for arch 'i386' ** checking whether the package can be loaded ... OK ** checking whether the package can be loaded with stated dependencies ... OK ** checking whether the package can be unloaded cleanly ... OK ** checking whether the namespace can be loaded with stated dependencies ... OK ** checking whether the namespace can be unloaded cleanly ... OK * loading checks for arch 'x64' ** checking whether the package can be loaded ... OK ** checking whether the package can be loaded with stated dependencies ... OK ** checking whether the package can be unloaded cleanly ... OK ** checking whether the namespace can be loaded with stated dependencies ... OK ** checking whether the namespace can be unloaded cleanly ... OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking contents of 'data' directory ... OK * checking data for non-ASCII characters ... OK * checking data for ASCII and uncompressed saves ... OK * checking files in 'vignettes' ... OK * checking examples ... ** running examples for arch 'i386' ... OK Examples with CPU (user + system) or elapsed time > 5s user system elapsed seventyGeneData 5.36 0.17 5.53 ** running examples for arch 'x64' ... OK * checking for unstated dependencies in vignettes ... OK * checking package vignettes in 'inst/doc' ... OK * checking running R code from vignettes ... SKIPPED * checking re-building of vignette outputs ... SKIPPED * checking PDF version of manual ... OK * DONE Status: 2 NOTEs See 'D:/biocbuild/bbs-3.13-data-experiment/meat/seventyGeneData.Rcheck/00check.log' for details.
seventyGeneData.Rcheck/00install.out
############################################################################## ############################################################################## ### ### Running command: ### ### C:\cygwin\bin\curl.exe -O http://172.29.0.4/BBS/3.13/data-experiment/src/contrib/seventyGeneData_1.27.0.tar.gz && rm -rf seventyGeneData.buildbin-libdir && mkdir seventyGeneData.buildbin-libdir && D:\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=seventyGeneData.buildbin-libdir seventyGeneData_1.27.0.tar.gz && D:\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL seventyGeneData_1.27.0.zip && rm seventyGeneData_1.27.0.tar.gz seventyGeneData_1.27.0.zip ### ############################################################################## ############################################################################## % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 0 144M 0 705k 0 0 2915k 0 0:00:50 --:--:-- 0:00:50 2903k 7 144M 7 11.2M 0 0 9337k 0 0:00:15 0:00:01 0:00:14 9329k 68 144M 68 99.6M 0 0 44.6M 0 0:00:03 0:00:02 0:00:01 44.6M 100 144M 100 144M 0 0 54.6M 0 0:00:02 0:00:02 --:--:-- 54.6M install for i386 * installing *source* package 'seventyGeneData' ... ** using staged installation ** data ** inst ** help *** installing help indices converting help for package 'seventyGeneData' finding HTML links ... done seventyGeneData html REDIRECT:topic seventyGeneData-package -> seventyGeneData.html [ SUCCESS ] REDIRECT:topic seventyGeneData -> seventyGeneData.html [ SUCCESS ] vanDeVijver html REDIRECT:topic vanDeVijver -> vanDeVijver.html [ SUCCESS ] vantVeer html REDIRECT:topic vantVeer -> vantVeer.html [ SUCCESS ] ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'seventyGeneData' ... ** testing if installed package can be loaded * MD5 sums packaged installation of 'seventyGeneData' as seventyGeneData_1.27.0.zip * DONE (seventyGeneData) * installing to library 'D:/biocbuild/bbs-3.13-bioc/R/library' package 'seventyGeneData' successfully unpacked and MD5 sums checked
seventyGeneData.Rcheck/examples_i386/seventyGeneData-Ex.timings
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seventyGeneData.Rcheck/examples_x64/seventyGeneData-Ex.timings
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