Back to Multiple platform build/check report for BioC 3.13 experimental data |
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This page was generated on 2021-01-18 15:58:48 -0500 (Mon, 18 Jan 2021).
TO THE DEVELOPERS/MAINTAINERS OF THE miRNATarget PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page. |
Package 228/385 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | ||||||
miRNATarget 1.29.0 Y-h. Taguchi
| malbec2 | Linux (Ubuntu 20.04.1 LTS) / x86_64 | OK | OK | OK | ![]() | |||||
riesling1 | Windows Server 2019 Standard / x64 | OK | OK | [ OK ] |
Package: miRNATarget |
Version: 1.29.0 |
Command: D:\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD check --force-multiarch --install=check:miRNATarget.install-out.txt --library=D:\biocbuild\bbs-3.13-bioc\R\library --no-vignettes --timings miRNATarget_1.29.0.tar.gz |
StartedAt: 2021-01-18 11:32:35 -0500 (Mon, 18 Jan 2021) |
EndedAt: 2021-01-18 11:34:58 -0500 (Mon, 18 Jan 2021) |
EllapsedTime: 143.5 seconds |
RetCode: 0 |
Status: OK |
CheckDir: miRNATarget.Rcheck |
Warnings: 0 |
############################################################################## ############################################################################## ### ### Running command: ### ### D:\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD check --force-multiarch --install=check:miRNATarget.install-out.txt --library=D:\biocbuild\bbs-3.13-bioc\R\library --no-vignettes --timings miRNATarget_1.29.0.tar.gz ### ############################################################################## ############################################################################## * using log directory 'D:/biocbuild/bbs-3.13-data-experiment/meat/miRNATarget.Rcheck' * using R Under development (unstable) (2020-12-30 r79736) * using platform: x86_64-w64-mingw32 (64-bit) * using session charset: ISO8859-1 * using option '--no-vignettes' * checking for file 'miRNATarget/DESCRIPTION' ... OK * this is package 'miRNATarget' version '1.29.0' * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... NOTE Found the following hidden files and directories: vignettes/.goutputstream-8N717W These were most likely included in error. See section 'Package structure' in the 'Writing R Extensions' manual. * checking for portable file names ... OK * checking whether package 'miRNATarget' can be installed ... OK * checking installed package size ... NOTE installed size is 60.3Mb sub-directories of 1Mb or more: data 59.3Mb * checking package directory ... OK * checking 'build' directory ... OK * checking DESCRIPTION meta-information ... NOTE Malformed Description field: should contain one or more complete sentences. * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * loading checks for arch 'i386' ** checking whether the package can be loaded ... OK ** checking whether the package can be loaded with stated dependencies ... OK ** checking whether the package can be unloaded cleanly ... OK ** checking whether the namespace can be loaded with stated dependencies ... OK ** checking whether the namespace can be unloaded cleanly ... OK * loading checks for arch 'x64' ** checking whether the package can be loaded ... OK ** checking whether the package can be loaded with stated dependencies ... OK ** checking whether the package can be unloaded cleanly ... OK ** checking whether the namespace can be loaded with stated dependencies ... OK ** checking whether the namespace can be unloaded cleanly ... OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking contents of 'data' directory ... OK * checking data for non-ASCII characters ... OK * checking data for ASCII and uncompressed saves ... OK * checking files in 'vignettes' ... OK * checking examples ... ** running examples for arch 'i386' ... OK ** running examples for arch 'x64' ... OK * checking for unstated dependencies in vignettes ... OK * checking package vignettes in 'inst/doc' ... OK * checking running R code from vignettes ... SKIPPED * checking re-building of vignette outputs ... SKIPPED * checking PDF version of manual ... OK * DONE Status: 3 NOTEs See 'D:/biocbuild/bbs-3.13-data-experiment/meat/miRNATarget.Rcheck/00check.log' for details.
miRNATarget.Rcheck/00install.out
############################################################################## ############################################################################## ### ### Running command: ### ### C:\cygwin\bin\curl.exe -O http://172.29.0.4/BBS/3.13/data-experiment/src/contrib/miRNATarget_1.29.0.tar.gz && rm -rf miRNATarget.buildbin-libdir && mkdir miRNATarget.buildbin-libdir && D:\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=miRNATarget.buildbin-libdir miRNATarget_1.29.0.tar.gz && D:\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL miRNATarget_1.29.0.zip && rm miRNATarget_1.29.0.tar.gz miRNATarget_1.29.0.zip ### ############################################################################## ############################################################################## % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 81 51.8M 81 42.1M 0 0 85.9M 0 --:--:-- --:--:-- --:--:-- 85.7M 100 51.8M 100 51.8M 0 0 78.0M 0 --:--:-- --:--:-- --:--:-- 77.9M install for i386 * installing *source* package 'miRNATarget' ... ** using staged installation ** data ** help *** installing help indices converting help for package 'miRNATarget' finding HTML links ... done HS_conv_id html REDIRECT:topic HS_conv_id -> HS_conv_id.html [ SUCCESS ] HS_refseq_to_affy_hc_g110 html REDIRECT:topic HS_refseq_to_affy_hc_g110 -> HS_refseq_to_affy_hc_g110.html [ SUCCESS ] HS_refseq_to_affy_hg_focus html REDIRECT:topic HS_refseq_to_affy_hg_focus -> HS_refseq_to_affy_hg_focus.html [ SUCCESS ] HS_refseq_to_affy_hg_u133_plus_2 html REDIRECT:topic HS_refseq_to_affy_hg_u133_plus_2 -> HS_refseq_to_affy_hg_u133_plus_2.html [ SUCCESS ] HS_refseq_to_affy_hg_u133a html REDIRECT:topic HS_refseq_to_affy_hg_u133a -> HS_refseq_to_affy_hg_u133a.html [ SUCCESS ] HS_refseq_to_affy_hg_u133a_2 html REDIRECT:topic HS_refseq_to_affy_hg_u133a_2 -> HS_refseq_to_affy_hg_u133a_2.html [ SUCCESS ] 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MM_refseq_to_ensembl_gene_id html REDIRECT:topic MM_refseq_to_ensembl_gene_id -> MM_refseq_to_ensembl_gene_id.html [ SUCCESS ] MM_refseq_to_ensembl_peptide_id html REDIRECT:topic MM_refseq_to_ensembl_peptide_id -> MM_refseq_to_ensembl_peptide_id.html [ SUCCESS ] MM_refseq_to_ensembl_transcript_id html REDIRECT:topic MM_refseq_to_ensembl_transcript_id -> MM_refseq_to_ensembl_transcript_id.html [ SUCCESS ] MM_refseq_to_entrezgene html REDIRECT:topic MM_refseq_to_entrezgene -> MM_refseq_to_entrezgene.html [ SUCCESS ] MM_refseq_to_fantom html REDIRECT:topic MM_refseq_to_fantom -> MM_refseq_to_fantom.html [ SUCCESS ] MM_refseq_to_illumina_mousewg_6_v1 html REDIRECT:topic MM_refseq_to_illumina_mousewg_6_v1 -> MM_refseq_to_illumina_mousewg_6_v1.html [ SUCCESS ] MM_refseq_to_illumina_mousewg_6_v2 html REDIRECT:topic MM_refseq_to_illumina_mousewg_6_v2 -> MM_refseq_to_illumina_mousewg_6_v2.html [ SUCCESS ] MM_refseq_to_interpro html REDIRECT:topic MM_refseq_to_interpro -> MM_refseq_to_interpro.html [ SUCCESS ] MM_refseq_to_ipi html REDIRECT:topic MM_refseq_to_ipi -> MM_refseq_to_ipi.html [ SUCCESS ] MM_refseq_to_merops html REDIRECT:topic MM_refseq_to_merops -> MM_refseq_to_merops.html [ SUCCESS ] MM_refseq_to_mgi_id html REDIRECT:topic MM_refseq_to_mgi_id -> MM_refseq_to_mgi_id.html [ SUCCESS ] MM_refseq_to_mgi_symbol html REDIRECT:topic MM_refseq_to_mgi_symbol -> MM_refseq_to_mgi_symbol.html [ SUCCESS ] MM_refseq_to_mgi_transcript_name html REDIRECT:topic MM_refseq_to_mgi_transcript_name -> MM_refseq_to_mgi_transcript_name.html [ SUCCESS ] MM_refseq_to_pdb html REDIRECT:topic MM_refseq_to_pdb -> MM_refseq_to_pdb.html [ SUCCESS ] MM_refseq_to_pfam html REDIRECT:topic MM_refseq_to_pfam -> MM_refseq_to_pfam.html [ SUCCESS ] MM_refseq_to_phalanx_onearray html REDIRECT:topic MM_refseq_to_phalanx_onearray -> MM_refseq_to_phalanx_onearray.html [ SUCCESS ] MM_refseq_to_protein_id html REDIRECT:topic MM_refseq_to_protein_id -> MM_refseq_to_protein_id.html [ SUCCESS ] MM_refseq_to_refseq_dna html REDIRECT:topic MM_refseq_to_refseq_dna -> MM_refseq_to_refseq_dna.html [ SUCCESS ] MM_refseq_to_refseq_peptide html REDIRECT:topic MM_refseq_to_refseq_peptide -> MM_refseq_to_refseq_peptide.html [ SUCCESS ] MM_refseq_to_rfam html REDIRECT:topic MM_refseq_to_rfam -> MM_refseq_to_rfam.html [ SUCCESS ] MM_refseq_to_rfam_gene_name html REDIRECT:topic MM_refseq_to_rfam_gene_name -> MM_refseq_to_rfam_gene_name.html [ SUCCESS ] MM_refseq_to_rfam_transcript_name html REDIRECT:topic MM_refseq_to_rfam_transcript_name -> MM_refseq_to_rfam_transcript_name.html [ SUCCESS ] MM_refseq_to_smart html REDIRECT:topic MM_refseq_to_smart -> MM_refseq_to_smart.html [ SUCCESS ] MM_refseq_to_tigrfam html REDIRECT:topic MM_refseq_to_tigrfam -> MM_refseq_to_tigrfam.html [ SUCCESS ] MM_refseq_to_ucsc html REDIRECT:topic MM_refseq_to_ucsc -> MM_refseq_to_ucsc.html [ SUCCESS ] MM_refseq_to_unigene html REDIRECT:topic MM_refseq_to_unigene -> MM_refseq_to_unigene.html [ SUCCESS ] MM_refseq_to_uniprot_genename html REDIRECT:topic MM_refseq_to_uniprot_genename -> MM_refseq_to_uniprot_genename.html [ SUCCESS ] MM_refseq_to_uniprot_genename_transcript_name html REDIRECT:topic MM_refseq_to_MM_refseq_to_uniprot_genename_transcript_name -> MM_refseq_to_uniprot_genename_transcript_name.html [ SUCCESS ] REDIRECT:file MM_refseq_to_uniprot_genename_transcript_name.html -> MM_refseq_to_uniprot_genename_transcript_name.html [ SUCCESS ] MM_refseq_to_uniprot_sptrembl html REDIRECT:topic MM_refseq_to_MM_refseq_to_uniprot_sptrembl -> MM_refseq_to_uniprot_sptrembl.html [ SUCCESS ] REDIRECT:file MM_refseq_to_uniprot_sptrembl.html -> MM_refseq_to_uniprot_sptrembl.html [ SUCCESS ] MM_refseq_to_uniprot_swissprot html REDIRECT:topic MM_refseq_to_MM_refseq_to_uniprot_swissprot -> MM_refseq_to_uniprot_swissprot.html [ SUCCESS ] REDIRECT:file MM_refseq_to_uniprot_swissprot.html -> MM_refseq_to_uniprot_swissprot.html [ SUCCESS ] MM_refseq_to_uniprot_swissprot_accession html REDIRECT:topic MM_refseq_to_MM_refseq_to_uniprot_swissprot_accession -> MM_refseq_to_uniprot_swissprot_accession.html [ SUCCESS ] REDIRECT:file MM_refseq_to_uniprot_swissprot_accession.html -> MM_refseq_to_uniprot_swissprot_accession.html [ SUCCESS ] MM_refseq_to_wikigene_id html REDIRECT:topic MM_refseq_to_MM_refseq_to_wikigene_id -> MM_refseq_to_wikigene_id.html [ SUCCESS ] REDIRECT:file MM_refseq_to_wikigene_id.html -> MM_refseq_to_wikigene_id.html [ SUCCESS ] MM_refseq_to_wikigene_name html REDIRECT:topic MM_refseq_to_wikigene_name -> MM_refseq_to_wikigene_name.html [ SUCCESS ] TBL2 html REDIRECT:topic TBL2 -> TBL2.html [ SUCCESS ] TBL2_HS html REDIRECT:topic TBL2_HS -> TBL2_HS.html [ SUCCESS ] TBL2_MM html REDIRECT:topic TBL2_MM -> TBL2_MM.html [ SUCCESS ] conv_id html REDIRECT:topic conv_id -> conv_id.html [ SUCCESS ] id_conv html REDIRECT:topic id_conv -> id_conv.html [ SUCCESS ] ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'miRNATarget' ... ** testing if installed package can be loaded * MD5 sums packaged installation of 'miRNATarget' as miRNATarget_1.29.0.zip * DONE (miRNATarget) * installing to library 'D:/biocbuild/bbs-3.13-bioc/R/library' package 'miRNATarget' successfully unpacked and MD5 sums checked
miRNATarget.Rcheck/examples_i386/miRNATarget-Ex.timings
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miRNATarget.Rcheck/examples_x64/miRNATarget-Ex.timings
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