Michael Love
| Snapshot Date: 2021-01-14 09:00:13 -0500 (Thu, 14 Jan 2021) |
| URL: https://git.bioconductor.org/packages/macrophage |
| Branch: master |
| Last Commit: 24b8351 |
| Last Changed Date: 2020-10-27 10:29:13 -0500 (Tue, 27 Oct 2020) |
| Back to Multiple platform build/check report for BioC 3.13 experimental data |
|
This page was generated on 2021-01-14 15:59:08 -0500 (Thu, 14 Jan 2021).
| TO THE DEVELOPERS/MAINTAINERS OF THE macrophage PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 205/385 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | ||||||
| macrophage 1.7.0 Michael Love
| malbec2 | Linux (Ubuntu 20.04.1 LTS) / x86_64 | OK | OK | OK | | |||||
| riesling1 | Windows Server 2019 Standard / x64 | OK | OK | [ OK ] |
| Package: macrophage |
| Version: 1.7.0 |
| Command: D:\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD check --force-multiarch --install=check:macrophage.install-out.txt --library=D:\biocbuild\bbs-3.13-bioc\R\library --no-vignettes --timings macrophage_1.7.0.tar.gz |
| StartedAt: 2021-01-14 11:26:21 -0500 (Thu, 14 Jan 2021) |
| EndedAt: 2021-01-14 11:26:58 -0500 (Thu, 14 Jan 2021) |
| EllapsedTime: 36.6 seconds |
| RetCode: 0 |
| Status: OK |
| CheckDir: macrophage.Rcheck |
| Warnings: 0 |
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### Running command:
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### D:\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD check --force-multiarch --install=check:macrophage.install-out.txt --library=D:\biocbuild\bbs-3.13-bioc\R\library --no-vignettes --timings macrophage_1.7.0.tar.gz
###
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* using log directory 'D:/biocbuild/bbs-3.13-data-experiment/meat/macrophage.Rcheck'
* using R Under development (unstable) (2020-12-30 r79736)
* using platform: x86_64-w64-mingw32 (64-bit)
* using session charset: ISO8859-1
* using option '--no-vignettes'
* checking for file 'macrophage/DESCRIPTION' ... OK
* this is package 'macrophage' version '1.7.0'
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking whether package 'macrophage' can be installed ... OK
* checking installed package size ... NOTE
installed size is 514.5Mb
sub-directories of 1Mb or more:
data 8.5Mb
extdata 505.9Mb
* checking package directory ... OK
* checking 'build' directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* loading checks for arch 'i386'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
* loading checks for arch 'x64'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of 'data' directory ... OK
* checking data for non-ASCII characters ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking files in 'vignettes' ... OK
* checking examples ... NONE
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes in 'inst/doc' ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignette outputs ... SKIPPED
* checking PDF version of manual ... OK
* DONE
Status: 1 NOTE
See
'D:/biocbuild/bbs-3.13-data-experiment/meat/macrophage.Rcheck/00check.log'
for details.
macrophage.Rcheck/00install.out
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###
### Running command:
###
### C:\cygwin\bin\curl.exe -O http://172.29.0.4/BBS/3.13/data-experiment/src/contrib/macrophage_1.7.0.tar.gz && rm -rf macrophage.buildbin-libdir && mkdir macrophage.buildbin-libdir && D:\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=macrophage.buildbin-libdir macrophage_1.7.0.tar.gz && D:\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL macrophage_1.7.0.zip && rm macrophage_1.7.0.tar.gz macrophage_1.7.0.zip
###
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% Total % Received % Xferd Average Speed Time Time Time Current
Dload Upload Total Spent Left Speed
0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0
0 511M 0 15811 0 0 37378 0 3:59:05 --:--:-- 3:59:05 37290
0 511M 0 1834k 0 0 1290k 0 0:06:45 0:00:01 0:06:44 1289k
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29 511M 29 149M 0 0 13.1M 0 0:00:38 0:00:11 0:00:27 14.0M
30 511M 30 154M 0 0 12.4M 0 0:00:41 0:00:12 0:00:29 14.9M
31 511M 31 158M 0 0 11.8M 0 0:00:43 0:00:13 0:00:30 14.2M
32 511M 32 165M 0 0 11.4M 0 0:00:44 0:00:14 0:00:30 15.0M
44 511M 44 229M 0 0 14.6M 0 0:00:34 0:00:15 0:00:19 20.7M
45 511M 45 230M 0 0 14.0M 0 0:00:36 0:00:16 0:00:20 16.2M
45 511M 45 232M 0 0 13.1M 0 0:00:38 0:00:17 0:00:21 15.0M
45 511M 45 233M 0 0 12.6M 0 0:00:40 0:00:18 0:00:22 14.9M
46 511M 46 235M 0 0 12.1M 0 0:00:42 0:00:19 0:00:23 14.0M
58 511M 58 300M 0 0 14.7M 0 0:00:34 0:00:20 0:00:14 14.9M
67 511M 67 343M 0 0 16.0M 0 0:00:31 0:00:21 0:00:10 22.5M
81 511M 81 418M 0 0 18.7M 0 0:00:27 0:00:22 0:00:05 39.1M
94 511M 94 481M 0 0 20.5M 0 0:00:24 0:00:23 0:00:01 50.1M
100 511M 100 511M 0 0 21.4M 0 0:00:23 0:00:23 --:--:-- 62.8M
install for i386
* installing *source* package 'macrophage' ...
** using staged installation
** data
** inst
** help
*** installing help indices
converting help for package 'macrophage'
finding HTML links ... done
gse html
REDIRECT:topic gse -> gse.html [ SUCCESS ]
macrophage-package html
REDIRECT:topic macrophage-package -> macrophage-package.html [ SUCCESS ]
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'macrophage' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'macrophage' as macrophage_1.7.0.zip
* DONE (macrophage)
* installing to library 'D:/biocbuild/bbs-3.13-bioc/R/library'
package 'macrophage' successfully unpacked and MD5 sums checked