Back to Multiple platform build/check report for BioC 3.13 experimental data |
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This page was generated on 2021-03-01 15:56:10 -0500 (Mon, 01 Mar 2021).
To the developers/maintainers of the lungExpression package: Please make sure to use the following settings in order to reproduce any error or warning you see on this page. |
Package 203/391 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | ||||||||
lungExpression 0.29.0 Robert Scharpf
| rex3 | Linux (Ubuntu 20.04.2 LTS) / x86_64 | OK | OK | OK | ![]() | |||||||
riesling1 | Windows Server 2019 Standard / x64 | OK | OK | OK | |||||||||
Package: lungExpression |
Version: 0.29.0 |
Command: D:\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD check --force-multiarch --install=check:lungExpression.install-out.txt --library=D:\biocbuild\bbs-3.13-bioc\R\library --no-vignettes --timings lungExpression_0.29.0.tar.gz |
StartedAt: 2021-03-01 11:41:54 -0500 (Mon, 01 Mar 2021) |
EndedAt: 2021-03-01 11:42:27 -0500 (Mon, 01 Mar 2021) |
EllapsedTime: 33.5 seconds |
RetCode: 0 |
Status: OK |
CheckDir: lungExpression.Rcheck |
Warnings: 0 |
############################################################################## ############################################################################## ### ### Running command: ### ### D:\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD check --force-multiarch --install=check:lungExpression.install-out.txt --library=D:\biocbuild\bbs-3.13-bioc\R\library --no-vignettes --timings lungExpression_0.29.0.tar.gz ### ############################################################################## ############################################################################## * using log directory 'D:/biocbuild/bbs-3.13-data-experiment/meat/lungExpression.Rcheck' * using R Under development (unstable) (2021-02-08 r79971) * using platform: x86_64-w64-mingw32 (64-bit) * using session charset: ISO8859-1 * using option '--no-vignettes' * checking for file 'lungExpression/DESCRIPTION' ... OK * this is package 'lungExpression' version '0.29.0' * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking whether package 'lungExpression' can be installed ... OK * checking installed package size ... NOTE installed size is 5.8Mb sub-directories of 1Mb or more: data 5.7Mb * checking package directory ... OK * checking DESCRIPTION meta-information ... NOTE Malformed Description field: should contain one or more complete sentences. * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * loading checks for arch 'i386' ** checking whether the package can be loaded ... OK ** checking whether the package can be loaded with stated dependencies ... OK ** checking whether the package can be unloaded cleanly ... OK ** checking whether the namespace can be loaded with stated dependencies ... OK ** checking whether the namespace can be unloaded cleanly ... OK * loading checks for arch 'x64' ** checking whether the package can be loaded ... OK ** checking whether the package can be loaded with stated dependencies ... OK ** checking whether the package can be unloaded cleanly ... OK ** checking whether the namespace can be loaded with stated dependencies ... OK ** checking whether the namespace can be unloaded cleanly ... OK * checking Rd files ... NOTE prepare_Rd: harvard.Rd:10-11: Dropping empty section \format prepare_Rd: harvard.Rd:17-18: Dropping empty section \source prepare_Rd: michigan.Rd:10-11: Dropping empty section \format prepare_Rd: michigan.Rd:17-18: Dropping empty section \source prepare_Rd: stanford.Rd:9-10: Dropping empty section \format prepare_Rd: stanford.Rd:16-18: Dropping empty section \source * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking contents of 'data' directory ... OK * checking data for non-ASCII characters ... OK * checking data for ASCII and uncompressed saves ... OK * checking examples ... ** running examples for arch 'i386' ... OK ** running examples for arch 'x64' ... OK * checking PDF version of manual ... OK * DONE Status: 3 NOTEs See 'D:/biocbuild/bbs-3.13-data-experiment/meat/lungExpression.Rcheck/00check.log' for details.
lungExpression.Rcheck/00install.out
############################################################################## ############################################################################## ### ### Running command: ### ### C:\cygwin\bin\curl.exe -O http://155.52.173.35/BBS/3.13/data-experiment/src/contrib/lungExpression_0.29.0.tar.gz && rm -rf lungExpression.buildbin-libdir && mkdir lungExpression.buildbin-libdir && D:\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=lungExpression.buildbin-libdir lungExpression_0.29.0.tar.gz && D:\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL lungExpression_0.29.0.zip && rm lungExpression_0.29.0.tar.gz lungExpression_0.29.0.zip ### ############################################################################## ############################################################################## % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 3 5817k 3 190k 0 0 402k 0 0:00:14 --:--:-- 0:00:14 401k 58 5817k 58 3376k 0 0 2274k 0 0:00:02 0:00:01 0:00:01 2273k 100 5817k 100 5817k 0 0 3378k 0 0:00:01 0:00:01 --:--:-- 3376k install for i386 * installing *source* package 'lungExpression' ... ** using staged installation ** data ** help *** installing help indices converting help for package 'lungExpression' finding HTML links ... done harvard html REDIRECT:topic harvard -> harvard.html [ SUCCESS ] michigan html REDIRECT:topic michigan -> michigan.html [ SUCCESS ] stanford html REDIRECT:topic stanford -> stanford.html [ SUCCESS ] ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'lungExpression' ... ** testing if installed package can be loaded * MD5 sums packaged installation of 'lungExpression' as lungExpression_0.29.0.zip * DONE (lungExpression) * installing to library 'D:/biocbuild/bbs-3.13-bioc/R/library' package 'lungExpression' successfully unpacked and MD5 sums checked
lungExpression.Rcheck/examples_i386/lungExpression-Ex.timings
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lungExpression.Rcheck/examples_x64/lungExpression-Ex.timings
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