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BUILD report for gskb on riesling1

This page was generated on 2021-01-14 15:59:07 -0500 (Thu, 14 Jan 2021).

TO THE DEVELOPERS/MAINTAINERS OF THE gskb PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page.
Package 149/385HostnameOS / ArchINSTALLBUILDCHECK
gskb 1.23.1
Valerie Bares
Snapshot Date: 2021-01-14 09:00:13 -0500 (Thu, 14 Jan 2021)
URL: https://git.bioconductor.org/packages/gskb
Branch: master
Last Commit: e04617d
Last Changed Date: 2020-12-07 10:54:31 -0500 (Mon, 07 Dec 2020)
malbec2 Linux (Ubuntu 20.04.1 LTS) / x86_64  OK  ERROR  skipped 
riesling1 Windows Server 2019 Standard / x64  OK [ ERROR ] skipped 

Summary

Package: gskb
Version: 1.23.1
Command: chmod a+r gskb -R && D:\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data gskb
StartedAt: 2021-01-14 10:38:11 -0500 (Thu, 14 Jan 2021)
EndedAt: 2021-01-14 10:38:16 -0500 (Thu, 14 Jan 2021)
EllapsedTime: 5.0 seconds
RetCode: 1
Status:  ERROR  
PackageFile: None
PackageFileSize: NA

Command output

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### Running command:
###
###   chmod a+r gskb -R && D:\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data gskb
###
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* checking for file 'gskb/DESCRIPTION' ... OK
* preparing 'gskb':
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building 'gskb.Rnw' using Sweave
Warning: Package 'gskb' is deprecated and will be removed from Bioconductor
  version 3.14

Error: processing vignette 'gskb.Rnw' failed with diagnostics:
 chunk 5 
Error in library(PGSEA) : there is no package called 'PGSEA'

--- failed re-building 'gskb.Rnw'

SUMMARY: processing the following file failed:
  'gskb.Rnw'

Error: Vignette re-building failed.
Execution halted