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###
### Running command:
###
###   D:\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD check --force-multiarch --install=check:diggitdata.install-out.txt --library=D:\biocbuild\bbs-3.13-bioc\R\library --no-vignettes --timings diggitdata_1.23.0.tar.gz
###
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* using log directory 'D:/biocbuild/bbs-3.13-data-experiment/meat/diggitdata.Rcheck'
* using R Under development (unstable) (2020-12-30 r79736)
* using platform: x86_64-w64-mingw32 (64-bit)
* using session charset: ISO8859-1
* using option '--no-vignettes'
* checking for file 'diggitdata/DESCRIPTION' ... OK
* checking extension type ... Package
* this is package 'diggitdata' version '1.23.0'
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking whether package 'diggitdata' can be installed ... OK
* checking installed package size ... NOTE
  installed size is 47.3Mb
  sub-directories of 1Mb or more:
    data  47.2Mb
* checking package directory ... OK
* checking 'build' directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* loading checks for arch 'i386'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
* loading checks for arch 'x64'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of 'data' directory ... OK
* checking data for non-ASCII characters ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking files in 'vignettes' ... OK
* checking examples ...
** running examples for arch 'i386' ... OK
** running examples for arch 'x64' ... OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes in 'inst/doc' ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignette outputs ... SKIPPED
* checking PDF version of manual ... OK
* DONE

Status: 1 NOTE
See
  'D:/biocbuild/bbs-3.13-data-experiment/meat/diggitdata.Rcheck/00check.log'
for details.

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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O http://172.29.0.4/BBS/3.13/data-experiment/src/contrib/diggitdata_1.23.0.tar.gz && rm -rf diggitdata.buildbin-libdir && mkdir diggitdata.buildbin-libdir && D:\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=diggitdata.buildbin-libdir diggitdata_1.23.0.tar.gz && D:\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL diggitdata_1.23.0.zip && rm diggitdata_1.23.0.tar.gz diggitdata_1.23.0.zip
###
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  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
100 47.2M  100 47.2M    0     0  60.6M      0 --:--:-- --:--:-- --:--:-- 60.6M

install for i386

* installing *source* package 'diggitdata' ...
** using staged installation
** data
** help
*** installing help indices
  converting help for package 'diggitdata'
    finding HTML links ... done
    diggitdata-package                      html  
REDIRECT:topic	 diggitdata-package -> diggitdata-package.html [ SUCCESS ]
REDIRECT:topic	 diggitdata -> diggitdata-package.html [ SUCCESS ]
    gbm.aracne                              html  
REDIRECT:topic	 gbmTFregulon -> gbm.aracne.html [ SUCCESS ]
REDIRECT:file	 gbm.aracne.html -> gbm.aracne.html [ SUCCESS ]
    gbm.cnv                                 html  
REDIRECT:topic	 gbmCNV -> gbm.cnv.html [ SUCCESS ]
REDIRECT:file	 gbm.cnv.html -> gbm.cnv.html [ SUCCESS ]
    gbm.cnv.normal                          html  
REDIRECT:topic	 gbmCNVnormal -> gbm.cnv.normal.html [ SUCCESS ]
REDIRECT:file	 gbm.cnv.normal.html -> gbm.cnv.normal.html [ SUCCESS ]
    gbm.expression                          html  
REDIRECT:topic	 gbmExprs -> gbm.expression.html [ SUCCESS ]
REDIRECT:file	 gbm.expression.html -> gbm.expression.html [ SUCCESS ]
    gbm.mindy                               html  
REDIRECT:topic	 gbmMindy -> gbm.mindy.html [ SUCCESS ]
REDIRECT:file	 gbm.mindy.html -> gbm.mindy.html [ SUCCESS ]
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'diggitdata' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'diggitdata' as diggitdata_1.23.0.zip
* DONE (diggitdata)
* installing to library 'D:/biocbuild/bbs-3.13-bioc/R/library'
package 'diggitdata' successfully unpacked and MD5 sums checked