Back to Multiple platform build/check report for BioC 3.13 experimental data |
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This page was generated on 2021-01-21 16:01:25 -0500 (Thu, 21 Jan 2021).
TO THE DEVELOPERS/MAINTAINERS OF THE bsseqData PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page. |
Package 43/386 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | ||||||
bsseqData 0.29.0 Kasper Daniel Hansen
| malbec2 | Linux (Ubuntu 20.04.1 LTS) / x86_64 | OK | OK | OK | ![]() | |||||
riesling1 | Windows Server 2019 Standard / x64 | OK | OK | [ OK ] |
Package: bsseqData |
Version: 0.29.0 |
Command: D:\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD check --force-multiarch --install=check:bsseqData.install-out.txt --library=D:\biocbuild\bbs-3.13-bioc\R\library --no-vignettes --timings bsseqData_0.29.0.tar.gz |
StartedAt: 2021-01-21 11:13:35 -0500 (Thu, 21 Jan 2021) |
EndedAt: 2021-01-21 11:15:58 -0500 (Thu, 21 Jan 2021) |
EllapsedTime: 143.5 seconds |
RetCode: 0 |
Status: OK |
CheckDir: bsseqData.Rcheck |
Warnings: 0 |
############################################################################## ############################################################################## ### ### Running command: ### ### D:\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD check --force-multiarch --install=check:bsseqData.install-out.txt --library=D:\biocbuild\bbs-3.13-bioc\R\library --no-vignettes --timings bsseqData_0.29.0.tar.gz ### ############################################################################## ############################################################################## * using log directory 'D:/biocbuild/bbs-3.13-data-experiment/meat/bsseqData.Rcheck' * using R Under development (unstable) (2020-12-30 r79736) * using platform: x86_64-w64-mingw32 (64-bit) * using session charset: ISO8859-1 * using option '--no-vignettes' * checking for file 'bsseqData/DESCRIPTION' ... OK * this is package 'bsseqData' version '0.29.0' * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking whether package 'bsseqData' can be installed ... OK * checking installed package size ... NOTE installed size is 200.9Mb sub-directories of 1Mb or more: data 140.0Mb umtab 60.7Mb * checking package directory ... OK * checking DESCRIPTION meta-information ... NOTE Malformed Description field: should contain one or more complete sentences. * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * loading checks for arch 'i386' ** checking whether the package can be loaded ... OK ** checking whether the package can be loaded with stated dependencies ... OK ** checking whether the package can be unloaded cleanly ... OK ** checking whether the namespace can be loaded with stated dependencies ... OK ** checking whether the namespace can be unloaded cleanly ... OK * loading checks for arch 'x64' ** checking whether the package can be loaded ... OK ** checking whether the package can be loaded with stated dependencies ... OK ** checking whether the package can be unloaded cleanly ... OK ** checking whether the namespace can be loaded with stated dependencies ... OK ** checking whether the namespace can be unloaded cleanly ... OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking contents of 'data' directory ... OK * checking data for non-ASCII characters ... OK * checking data for ASCII and uncompressed saves ... OK * checking examples ... ** running examples for arch 'i386' ... OK ** running examples for arch 'x64' ... OK * checking PDF version of manual ... OK * DONE Status: 2 NOTEs See 'D:/biocbuild/bbs-3.13-data-experiment/meat/bsseqData.Rcheck/00check.log' for details.
bsseqData.Rcheck/00install.out
############################################################################## ############################################################################## ### ### Running command: ### ### C:\cygwin\bin\curl.exe -O http://172.29.0.4/BBS/3.13/data-experiment/src/contrib/bsseqData_0.29.0.tar.gz && rm -rf bsseqData.buildbin-libdir && mkdir bsseqData.buildbin-libdir && D:\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=bsseqData.buildbin-libdir bsseqData_0.29.0.tar.gz && D:\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL bsseqData_0.29.0.zip && rm bsseqData_0.29.0.tar.gz bsseqData_0.29.0.zip ### ############################################################################## ############################################################################## % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 20 128M 20 25.9M 0 0 95.2M 0 0:00:01 --:--:-- 0:00:01 94.8M 100 128M 100 128M 0 0 109M 0 0:00:01 0:00:01 --:--:-- 109M install for i386 * installing *source* package 'bsseqData' ... ** using staged installation ** data *** moving datasets to lazyload DB ** inst ** help *** installing help indices converting help for package 'bsseqData' finding HTML links ... done BS.cancer.ex html REDIRECT:topic BS.cancer.ex -> BS.cancer.ex.html [ SUCCESS ] BS.cancer.ex.fit html REDIRECT:topic BS.cancer.ex.fit -> BS.cancer.ex.fit.html [ SUCCESS ] BS.cancer.ex.tstat html REDIRECT:topic BS.cancer.ex.tstat -> BS.cancer.ex.tstat.html [ SUCCESS ] keepLoci.ex html REDIRECT:topic keepLoci.ex -> keepLoci.ex.html [ SUCCESS ] ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'bsseqData' ... ** testing if installed package can be loaded * MD5 sums packaged installation of 'bsseqData' as bsseqData_0.29.0.zip * DONE (bsseqData) * installing to library 'D:/biocbuild/bbs-3.13-bioc/R/library' package 'bsseqData' successfully unpacked and MD5 sums checked
bsseqData.Rcheck/examples_i386/bsseqData-Ex.timings
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bsseqData.Rcheck/examples_x64/bsseqData-Ex.timings
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