Michael Lawrence
| Snapshot Date: 2021-01-14 09:00:13 -0500 (Thu, 14 Jan 2021) |
| URL: https://git.bioconductor.org/packages/VariantToolsData |
| Branch: master |
| Last Commit: b62c1ca |
| Last Changed Date: 2020-10-27 10:22:22 -0500 (Tue, 27 Oct 2020) |
| Back to Multiple platform build/check report for BioC 3.13 experimental data |
|
This page was generated on 2021-01-14 15:59:12 -0500 (Thu, 14 Jan 2021).
| TO THE DEVELOPERS/MAINTAINERS OF THE VariantToolsData PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 374/385 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | ||||||
| VariantToolsData 1.15.0 Michael Lawrence
| malbec2 | Linux (Ubuntu 20.04.1 LTS) / x86_64 | OK | OK | WARNINGS | | |||||
| riesling1 | Windows Server 2019 Standard / x64 | [ OK ] | OK | WARNINGS |
| Package: VariantToolsData |
| Version: 1.15.0 |
| Command: C:\cygwin\bin\curl.exe -O http://172.29.0.4/BBS/3.13/data-experiment/src/contrib/VariantToolsData_1.15.0.tar.gz && rm -rf VariantToolsData.buildbin-libdir && mkdir VariantToolsData.buildbin-libdir && D:\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=VariantToolsData.buildbin-libdir VariantToolsData_1.15.0.tar.gz && D:\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL VariantToolsData_1.15.0.zip && rm VariantToolsData_1.15.0.tar.gz VariantToolsData_1.15.0.zip |
| StartedAt: 2021-01-14 10:08:39 -0500 (Thu, 14 Jan 2021) |
| EndedAt: 2021-01-14 10:09:52 -0500 (Thu, 14 Jan 2021) |
| EllapsedTime: 72.5 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O http://172.29.0.4/BBS/3.13/data-experiment/src/contrib/VariantToolsData_1.15.0.tar.gz && rm -rf VariantToolsData.buildbin-libdir && mkdir VariantToolsData.buildbin-libdir && D:\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=VariantToolsData.buildbin-libdir VariantToolsData_1.15.0.tar.gz && D:\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL VariantToolsData_1.15.0.zip && rm VariantToolsData_1.15.0.tar.gz VariantToolsData_1.15.0.zip
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% Total % Received % Xferd Average Speed Time Time Time Current
Dload Upload Total Spent Left Speed
0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0
0 201M 0 724k 0 0 3602k 0 0:00:57 --:--:-- 0:00:57 3584k
16 201M 16 33.1M 0 0 29.0M 0 0:00:06 0:00:01 0:00:05 29.0M
46 201M 46 93.1M 0 0 43.4M 0 0:00:04 0:00:02 0:00:02 43.4M
67 201M 67 136M 0 0 43.5M 0 0:00:04 0:00:03 0:00:01 43.4M
100 201M 100 201M 0 0 53.0M 0 0:00:03 0:00:03 --:--:-- 53.0M
install for i386
* installing *source* package 'VariantToolsData' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'VariantToolsData'
finding HTML links ... done
TP53Region html
REDIRECT:topic TP53Region -> TP53Region.html [ SUCCESS ]
geno html
REDIRECT:topic geno -> geno.html [ SUCCESS ]
repeats html
REDIRECT:topic repeats -> repeats.html [ SUCCESS ]
sumDepths html
REDIRECT:topic sumDepths -> sumDepths.html [ SUCCESS ]
tallies html
REDIRECT:topic tallies -> tallies.html [ SUCCESS ]
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'VariantToolsData' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'VariantToolsData' as VariantToolsData_1.15.0.zip
* DONE (VariantToolsData)
* installing to library 'D:/biocbuild/bbs-3.13-bioc/R/library'
package 'VariantToolsData' successfully unpacked and MD5 sums checked