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INSTALL report for TCGAbiolinksGUI.data on riesling1

This page was generated on 2021-01-14 15:59:12 -0500 (Thu, 14 Jan 2021).

TO THE DEVELOPERS/MAINTAINERS OF THE TCGAbiolinksGUI.data PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page.
Package 355/385HostnameOS / ArchINSTALLBUILDCHECK
TCGAbiolinksGUI.data 1.11.0
Tiago Chedraoui Silva
Snapshot Date: 2021-01-14 09:00:13 -0500 (Thu, 14 Jan 2021)
URL: https://git.bioconductor.org/packages/TCGAbiolinksGUI.data
Branch: master
Last Commit: c01fbf8
Last Changed Date: 2020-10-27 10:24:37 -0500 (Tue, 27 Oct 2020)
malbec2 Linux (Ubuntu 20.04.1 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
riesling1 Windows Server 2019 Standard / x64 [ OK ] OK  OK 

Summary

Package: TCGAbiolinksGUI.data
Version: 1.11.0
Command: C:\cygwin\bin\curl.exe -O http://172.29.0.4/BBS/3.13/data-experiment/src/contrib/TCGAbiolinksGUI.data_1.11.0.tar.gz && rm -rf TCGAbiolinksGUI.data.buildbin-libdir && mkdir TCGAbiolinksGUI.data.buildbin-libdir && D:\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=TCGAbiolinksGUI.data.buildbin-libdir TCGAbiolinksGUI.data_1.11.0.tar.gz && D:\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL TCGAbiolinksGUI.data_1.11.0.zip && rm TCGAbiolinksGUI.data_1.11.0.tar.gz TCGAbiolinksGUI.data_1.11.0.zip
StartedAt: 2021-01-14 09:50:41 -0500 (Thu, 14 Jan 2021)
EndedAt: 2021-01-14 09:50:54 -0500 (Thu, 14 Jan 2021)
EllapsedTime: 13.1 seconds
RetCode: 0
Status:  OK  

Command output

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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O http://172.29.0.4/BBS/3.13/data-experiment/src/contrib/TCGAbiolinksGUI.data_1.11.0.tar.gz && rm -rf TCGAbiolinksGUI.data.buildbin-libdir && mkdir TCGAbiolinksGUI.data.buildbin-libdir && D:\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=TCGAbiolinksGUI.data.buildbin-libdir TCGAbiolinksGUI.data_1.11.0.tar.gz && D:\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL TCGAbiolinksGUI.data_1.11.0.zip && rm TCGAbiolinksGUI.data_1.11.0.tar.gz TCGAbiolinksGUI.data_1.11.0.zip
###
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  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
  1 20.4M    1  229k    0     0   227k      0  0:01:32  0:00:01  0:01:31  227k
  5 20.4M    5 1117k    0     0   502k      0  0:00:41  0:00:02  0:00:39  502k
 14 20.4M   14 3120k    0     0   974k      0  0:00:21  0:00:03  0:00:18  974k
 75 20.4M   75 15.5M    0     0  3979k      0  0:00:05  0:00:03  0:00:02 3978k
100 20.4M  100 20.4M    0     0  5193k      0  0:00:04  0:00:04 --:--:-- 5193k

install for i386

* installing *source* package 'TCGAbiolinksGUI.data' ...
** using staged installation
** R
** data
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'TCGAbiolinksGUI.data'
    finding HTML links ... done
    GDCdisease                              html  
REDIRECT:topic	 GDCdisease -> GDCdisease.html [ SUCCESS ]
    TCGAbiolinksGUI-data                    html  
REDIRECT:topic	 TCGAbiolinksGUI.data -> TCGAbiolinksGUI-data.html [ SUCCESS ]
REDIRECT:file	 TCGAbiolinksGUI-data.html -> TCGAbiolinksGUI-data.html [ SUCCESS ]
    gene.location.hg19                      html  
REDIRECT:topic	 gene.location.hg19 -> gene.location.hg19.html [ SUCCESS ]
    gene.location.hg38                      html  
REDIRECT:topic	 gene.location.hg38 -> gene.location.hg38.html [ SUCCESS ]
    glioma.gcimp.model                      html  
REDIRECT:topic	 glioma.gcimp.model -> glioma.gcimp.model.html [ SUCCESS ]
    glioma.idh.model                        html  
REDIRECT:topic	 glioma.idh.model -> glioma.idh.model.html [ SUCCESS ]
    glioma.idhmut.model                     html  
REDIRECT:topic	 glioma.idhmut.model -> glioma.idhmut.model.html [ SUCCESS ]
    glioma.idhwt.model                      html  
REDIRECT:topic	 glioma.idhwt.model -> glioma.idhwt.model.html [ SUCCESS ]
    linkedOmics.data                        html  
REDIRECT:topic	 linkedOmics.data -> linkedOmics.data.html [ SUCCESS ]
    maf.tumor                               html  
REDIRECT:topic	 maf.tumor -> maf.tumor.html [ SUCCESS ]
    probes2rm                               html  
REDIRECT:topic	 probes2rm -> probes2rm.html [ SUCCESS ]
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'TCGAbiolinksGUI.data' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'TCGAbiolinksGUI.data' as TCGAbiolinksGUI.data_1.11.0.zip
* DONE (TCGAbiolinksGUI.data)
* installing to library 'D:/biocbuild/bbs-3.13-bioc/R/library'
package 'TCGAbiolinksGUI.data' successfully unpacked and MD5 sums checked