Back to Multiple platform build/check report for BioC 3.13 experimental data |
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This page was generated on 2021-01-14 15:59:12 -0500 (Thu, 14 Jan 2021).
TO THE DEVELOPERS/MAINTAINERS OF THE TCGAbiolinksGUI.data PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page. |
Package 355/385 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | ||||||
TCGAbiolinksGUI.data 1.11.0 Tiago Chedraoui Silva
| malbec2 | Linux (Ubuntu 20.04.1 LTS) / x86_64 | OK | OK | OK | ![]() | |||||
riesling1 | Windows Server 2019 Standard / x64 | [ OK ] | OK | OK |
Package: TCGAbiolinksGUI.data |
Version: 1.11.0 |
Command: C:\cygwin\bin\curl.exe -O http://172.29.0.4/BBS/3.13/data-experiment/src/contrib/TCGAbiolinksGUI.data_1.11.0.tar.gz && rm -rf TCGAbiolinksGUI.data.buildbin-libdir && mkdir TCGAbiolinksGUI.data.buildbin-libdir && D:\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=TCGAbiolinksGUI.data.buildbin-libdir TCGAbiolinksGUI.data_1.11.0.tar.gz && D:\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL TCGAbiolinksGUI.data_1.11.0.zip && rm TCGAbiolinksGUI.data_1.11.0.tar.gz TCGAbiolinksGUI.data_1.11.0.zip |
StartedAt: 2021-01-14 09:50:41 -0500 (Thu, 14 Jan 2021) |
EndedAt: 2021-01-14 09:50:54 -0500 (Thu, 14 Jan 2021) |
EllapsedTime: 13.1 seconds |
RetCode: 0 |
Status: OK |
############################################################################## ############################################################################## ### ### Running command: ### ### C:\cygwin\bin\curl.exe -O http://172.29.0.4/BBS/3.13/data-experiment/src/contrib/TCGAbiolinksGUI.data_1.11.0.tar.gz && rm -rf TCGAbiolinksGUI.data.buildbin-libdir && mkdir TCGAbiolinksGUI.data.buildbin-libdir && D:\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=TCGAbiolinksGUI.data.buildbin-libdir TCGAbiolinksGUI.data_1.11.0.tar.gz && D:\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL TCGAbiolinksGUI.data_1.11.0.zip && rm TCGAbiolinksGUI.data_1.11.0.tar.gz TCGAbiolinksGUI.data_1.11.0.zip ### ############################################################################## ############################################################################## % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 1 20.4M 1 229k 0 0 227k 0 0:01:32 0:00:01 0:01:31 227k 5 20.4M 5 1117k 0 0 502k 0 0:00:41 0:00:02 0:00:39 502k 14 20.4M 14 3120k 0 0 974k 0 0:00:21 0:00:03 0:00:18 974k 75 20.4M 75 15.5M 0 0 3979k 0 0:00:05 0:00:03 0:00:02 3978k 100 20.4M 100 20.4M 0 0 5193k 0 0:00:04 0:00:04 --:--:-- 5193k install for i386 * installing *source* package 'TCGAbiolinksGUI.data' ... ** using staged installation ** R ** data ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'TCGAbiolinksGUI.data' finding HTML links ... done GDCdisease html REDIRECT:topic GDCdisease -> GDCdisease.html [ SUCCESS ] TCGAbiolinksGUI-data html REDIRECT:topic TCGAbiolinksGUI.data -> TCGAbiolinksGUI-data.html [ SUCCESS ] REDIRECT:file TCGAbiolinksGUI-data.html -> TCGAbiolinksGUI-data.html [ SUCCESS ] gene.location.hg19 html REDIRECT:topic gene.location.hg19 -> gene.location.hg19.html [ SUCCESS ] gene.location.hg38 html REDIRECT:topic gene.location.hg38 -> gene.location.hg38.html [ SUCCESS ] glioma.gcimp.model html REDIRECT:topic glioma.gcimp.model -> glioma.gcimp.model.html [ SUCCESS ] glioma.idh.model html REDIRECT:topic glioma.idh.model -> glioma.idh.model.html [ SUCCESS ] glioma.idhmut.model html REDIRECT:topic glioma.idhmut.model -> glioma.idhmut.model.html [ SUCCESS ] glioma.idhwt.model html REDIRECT:topic glioma.idhwt.model -> glioma.idhwt.model.html [ SUCCESS ] linkedOmics.data html REDIRECT:topic linkedOmics.data -> linkedOmics.data.html [ SUCCESS ] maf.tumor html REDIRECT:topic maf.tumor -> maf.tumor.html [ SUCCESS ] probes2rm html REDIRECT:topic probes2rm -> probes2rm.html [ SUCCESS ] ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'TCGAbiolinksGUI.data' ... ** testing if installed package can be loaded * MD5 sums packaged installation of 'TCGAbiolinksGUI.data' as TCGAbiolinksGUI.data_1.11.0.zip * DONE (TCGAbiolinksGUI.data) * installing to library 'D:/biocbuild/bbs-3.13-bioc/R/library' package 'TCGAbiolinksGUI.data' successfully unpacked and MD5 sums checked