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INSTALL report for TCGAWorkflowData on riesling1

This page was generated on 2021-01-14 15:59:12 -0500 (Thu, 14 Jan 2021).

TO THE DEVELOPERS/MAINTAINERS OF THE TCGAWorkflowData PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page.
Package 360/385HostnameOS / ArchINSTALLBUILDCHECK
TCGAWorkflowData 1.15.0
Tiago Chedraoui Silva
Snapshot Date: 2021-01-14 09:00:13 -0500 (Thu, 14 Jan 2021)
URL: https://git.bioconductor.org/packages/TCGAWorkflowData
Branch: master
Last Commit: c1b3065
Last Changed Date: 2020-10-27 10:22:55 -0500 (Tue, 27 Oct 2020)
malbec2 Linux (Ubuntu 20.04.1 LTS) / x86_64  OK  OK  WARNINGS UNNEEDED, same version exists in internal repository
riesling1 Windows Server 2019 Standard / x64 [ OK ] OK  WARNINGS 

Summary

Package: TCGAWorkflowData
Version: 1.15.0
Command: C:\cygwin\bin\curl.exe -O http://172.29.0.4/BBS/3.13/data-experiment/src/contrib/TCGAWorkflowData_1.15.0.tar.gz && rm -rf TCGAWorkflowData.buildbin-libdir && mkdir TCGAWorkflowData.buildbin-libdir && D:\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=TCGAWorkflowData.buildbin-libdir TCGAWorkflowData_1.15.0.tar.gz && D:\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL TCGAWorkflowData_1.15.0.zip && rm TCGAWorkflowData_1.15.0.tar.gz TCGAWorkflowData_1.15.0.zip
StartedAt: 2021-01-14 10:06:36 -0500 (Thu, 14 Jan 2021)
EndedAt: 2021-01-14 10:07:46 -0500 (Thu, 14 Jan 2021)
EllapsedTime: 69.2 seconds
RetCode: 0
Status:  OK  

Command output

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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O http://172.29.0.4/BBS/3.13/data-experiment/src/contrib/TCGAWorkflowData_1.15.0.tar.gz && rm -rf TCGAWorkflowData.buildbin-libdir && mkdir TCGAWorkflowData.buildbin-libdir && D:\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=TCGAWorkflowData.buildbin-libdir TCGAWorkflowData_1.15.0.tar.gz && D:\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL TCGAWorkflowData_1.15.0.zip && rm TCGAWorkflowData_1.15.0.tar.gz TCGAWorkflowData_1.15.0.zip
###
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  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
100 77.3M  100 77.3M    0     0   110M      0 --:--:-- --:--:-- --:--:--  110M

install for i386

* installing *source* package 'TCGAWorkflowData' ...
** using staged installation
** R
** data
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'TCGAWorkflowData'
    finding HTML links ... done
    GBMmut                                  html  
REDIRECT:topic	 GBMmut -> GBMmut.html [ SUCCESS ]
    LGGmut                                  html  
REDIRECT:topic	 LGGmut -> LGGmut.html [ SUCCESS ]
    TCGAWorkflowData                        html  
REDIRECT:topic	 TCGAWorkflowData -> TCGAWorkflowData.html [ SUCCESS ]
REDIRECT:topic	 TCGAWorkflowData-package -> TCGAWorkflowData.html [ SUCCESS ]
    cnvMatrix                               html  
REDIRECT:topic	 cnvMatrix -> cnvMatrix.html [ SUCCESS ]
    exp                                     html  
REDIRECT:topic	 exp -> exp.html [ SUCCESS ]
    exp.elmer                               html  
REDIRECT:topic	 exp.elmer -> exp.elmer.html [ SUCCESS ]
    gbm.exp                                 html  
REDIRECT:topic	 gbm.exp -> gbm.exp.html [ SUCCESS ]
    gbm.samples                             html  
REDIRECT:topic	 gbm.samples -> gbm.samples.html [ SUCCESS ]
    genes                                   html  
REDIRECT:topic	 genes -> genes.html [ SUCCESS ]
    genes_GR                                html  
REDIRECT:topic	 genes_GR -> genes_GR.html [ SUCCESS ]
    gistic.allbygene                        html  
REDIRECT:topic	 gistic.allbygene -> gistic.allbygene.html [ SUCCESS ]
    gistic.thresholedbygene                 html  
REDIRECT:topic	 gistic.thresholedbygene -> gistic.thresholedbygene.html [ SUCCESS ]
    histone.marks                           html  
REDIRECT:topic	 histone.marks -> histone.marks.html [ SUCCESS ]
    lgg.exp                                 html  
REDIRECT:topic	 lgg.exp -> lgg.exp.html [ SUCCESS ]
    lgg.samples                             html  
REDIRECT:topic	 lgg.samples -> lgg.samples.html [ SUCCESS ]
    markersMatrix                           html  
REDIRECT:topic	 markersMatrix -> markersMatrix.html [ SUCCESS ]
    met                                     html  
REDIRECT:topic	 met -> met.html [ SUCCESS ]
    met.elmer                               html  
REDIRECT:topic	 met.elmer -> met.elmer.html [ SUCCESS ]
    mut                                     html  
REDIRECT:topic	 mut -> mut.html [ SUCCESS ]
    tmp.biogrid                             html  
REDIRECT:topic	 tmp.biogrid -> tmp.biogrid.html [ SUCCESS ]
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'TCGAWorkflowData' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'TCGAWorkflowData' as TCGAWorkflowData_1.15.0.zip
* DONE (TCGAWorkflowData)
* installing to library 'D:/biocbuild/bbs-3.13-bioc/R/library'
package 'TCGAWorkflowData' successfully unpacked and MD5 sums checked