Back to Multiple platform build/check report for BioC 3.13 experimental data |
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This page was generated on 2021-01-14 15:59:12 -0500 (Thu, 14 Jan 2021).
TO THE DEVELOPERS/MAINTAINERS OF THE SNPhoodData PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page. |
Package 338/385 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | ||||||
SNPhoodData 1.21.0 Christian Arnold
| malbec2 | Linux (Ubuntu 20.04.1 LTS) / x86_64 | OK | OK | OK | ![]() | |||||
riesling1 | Windows Server 2019 Standard / x64 | OK | OK | [ OK ] |
Package: SNPhoodData |
Version: 1.21.0 |
Command: D:\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD check --force-multiarch --install=check:SNPhoodData.install-out.txt --library=D:\biocbuild\bbs-3.13-bioc\R\library --no-vignettes --timings SNPhoodData_1.21.0.tar.gz |
StartedAt: 2021-01-14 11:42:34 -0500 (Thu, 14 Jan 2021) |
EndedAt: 2021-01-14 11:42:59 -0500 (Thu, 14 Jan 2021) |
EllapsedTime: 25.4 seconds |
RetCode: 0 |
Status: OK |
CheckDir: SNPhoodData.Rcheck |
Warnings: 0 |
############################################################################## ############################################################################## ### ### Running command: ### ### D:\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD check --force-multiarch --install=check:SNPhoodData.install-out.txt --library=D:\biocbuild\bbs-3.13-bioc\R\library --no-vignettes --timings SNPhoodData_1.21.0.tar.gz ### ############################################################################## ############################################################################## * using log directory 'D:/biocbuild/bbs-3.13-data-experiment/meat/SNPhoodData.Rcheck' * using R Under development (unstable) (2020-12-30 r79736) * using platform: x86_64-w64-mingw32 (64-bit) * using session charset: ISO8859-1 * using option '--no-vignettes' * checking for file 'SNPhoodData/DESCRIPTION' ... OK * this is package 'SNPhoodData' version '1.21.0' * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking whether package 'SNPhoodData' can be installed ... OK * checking installed package size ... NOTE installed size is 233.5Mb sub-directories of 1Mb or more: extdata 233.4Mb * checking package directory ... OK * checking 'build' directory ... OK * checking DESCRIPTION meta-information ... NOTE BugReports field is not a suitable URL but appears to contain an email address not specified by mailto: nor contained in < > use the Contact field instead * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * loading checks for arch 'i386' ** checking whether the package can be loaded ... OK ** checking whether the package can be loaded with stated dependencies ... OK ** checking whether the package can be unloaded cleanly ... OK ** checking whether the namespace can be loaded with stated dependencies ... OK ** checking whether the namespace can be unloaded cleanly ... OK * loading checks for arch 'x64' ** checking whether the package can be loaded ... OK ** checking whether the package can be loaded with stated dependencies ... OK ** checking whether the package can be unloaded cleanly ... OK ** checking whether the namespace can be loaded with stated dependencies ... OK ** checking whether the namespace can be unloaded cleanly ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking files in 'vignettes' ... OK * checking examples ... NONE * checking for unstated dependencies in vignettes ... OK * checking package vignettes in 'inst/doc' ... OK * checking running R code from vignettes ... SKIPPED * checking re-building of vignette outputs ... SKIPPED * checking PDF version of manual ... OK * DONE Status: 2 NOTEs See 'D:/biocbuild/bbs-3.13-data-experiment/meat/SNPhoodData.Rcheck/00check.log' for details.
SNPhoodData.Rcheck/00install.out
############################################################################## ############################################################################## ### ### Running command: ### ### C:\cygwin\bin\curl.exe -O http://172.29.0.4/BBS/3.13/data-experiment/src/contrib/SNPhoodData_1.21.0.tar.gz && rm -rf SNPhoodData.buildbin-libdir && mkdir SNPhoodData.buildbin-libdir && D:\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=SNPhoodData.buildbin-libdir SNPhoodData_1.21.0.tar.gz && D:\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL SNPhoodData_1.21.0.zip && rm SNPhoodData_1.21.0.tar.gz SNPhoodData_1.21.0.zip ### ############################################################################## ############################################################################## % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 11 233M 11 25.9M 0 0 32.0M 0 0:00:07 --:--:-- 0:00:07 31.9M 44 233M 44 104M 0 0 57.8M 0 0:00:04 0:00:01 0:00:03 57.8M 74 233M 74 173M 0 0 61.6M 0 0:00:03 0:00:02 0:00:01 61.5M 100 233M 100 233M 0 0 65.4M 0 0:00:03 0:00:03 --:--:-- 65.4M install for i386 * installing *source* package 'SNPhoodData' ... ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'SNPhoodData' finding HTML links ... done SNPhoodData html REDIRECT:topic SNPhoodData -> SNPhoodData.html [ SUCCESS ] REDIRECT:topic SNPhoodData-package -> SNPhoodData.html [ SUCCESS ] ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'SNPhoodData' ... ** testing if installed package can be loaded * MD5 sums packaged installation of 'SNPhoodData' as SNPhoodData_1.21.0.zip * DONE (SNPhoodData) * installing to library 'D:/biocbuild/bbs-3.13-bioc/R/library' package 'SNPhoodData' successfully unpacked and MD5 sums checked