Xiaoxi Dong
| Snapshot Date: 2021-01-11 09:00:09 -0500 (Mon, 11 Jan 2021) |
| URL: https://git.bioconductor.org/packages/SBGNview.data |
| Branch: master |
| Last Commit: 6f92739 |
| Last Changed Date: 2020-10-27 10:30:31 -0500 (Tue, 27 Oct 2020) |
| Back to Multiple platform build/check report for BioC 3.13 experimental data |
|
This page was generated on 2021-01-11 15:59:33 -0500 (Mon, 11 Jan 2021).
| TO THE DEVELOPERS/MAINTAINERS OF THE SBGNview.data PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 320/385 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | ||||||
| SBGNview.data 1.5.0 Xiaoxi Dong
| malbec2 | Linux (Ubuntu 20.04.1 LTS) / x86_64 | OK | OK | OK | | |||||
| riesling1 | Windows Server 2019 Standard / x64 | [ OK ] | OK | WARNINGS |
| Package: SBGNview.data |
| Version: 1.5.0 |
| Command: C:\cygwin\bin\curl.exe -O http://172.29.0.4/BBS/3.13/data-experiment/src/contrib/SBGNview.data_1.5.0.tar.gz && rm -rf SBGNview.data.buildbin-libdir && mkdir SBGNview.data.buildbin-libdir && D:\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=SBGNview.data.buildbin-libdir SBGNview.data_1.5.0.tar.gz && D:\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL SBGNview.data_1.5.0.zip && rm SBGNview.data_1.5.0.tar.gz SBGNview.data_1.5.0.zip |
| StartedAt: 2021-01-11 10:05:14 -0500 (Mon, 11 Jan 2021) |
| EndedAt: 2021-01-11 10:05:57 -0500 (Mon, 11 Jan 2021) |
| EllapsedTime: 42.5 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O http://172.29.0.4/BBS/3.13/data-experiment/src/contrib/SBGNview.data_1.5.0.tar.gz && rm -rf SBGNview.data.buildbin-libdir && mkdir SBGNview.data.buildbin-libdir && D:\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=SBGNview.data.buildbin-libdir SBGNview.data_1.5.0.tar.gz && D:\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL SBGNview.data_1.5.0.zip && rm SBGNview.data_1.5.0.tar.gz SBGNview.data_1.5.0.zip
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install for i386
* installing *source* package 'SBGNview.data' ...
** using staged installation
** R
** data
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'SBGNview.data'
finding HTML links ... done
IFNg html
REDIRECT:topic IFNg -> IFNg.html [ SUCCESS ]
cancer.ds html
REDIRECT:topic cancer.ds -> cancer.ds.html [ SUCCESS ]
mapping html
REDIRECT:topic mapping -> mapping.html [ SUCCESS ]
REDIRECT:topic ENZYME_pathway.id -> mapping.html [ SUCCESS ]
REDIRECT:topic hsa_KO_ENTREZID -> mapping.html [ SUCCESS ]
REDIRECT:topic hsa_pathwayCommons_ENTREZID -> mapping.html [ SUCCESS ]
REDIRECT:topic mmu_KO_ENSEMBL -> mapping.html [ SUCCESS ]
REDIRECT:topic chebi_pathway.id -> mapping.html [ SUCCESS ]
REDIRECT:topic mmu_KO_ENTREZID -> mapping.html [ SUCCESS ]
REDIRECT:topic chebi_CompoundName -> mapping.html [ SUCCESS ]
REDIRECT:topic CompoundName_pathwayCommons -> mapping.html [ SUCCESS ]
REDIRECT:topic kegg.ligand_pathwayCommons -> mapping.html [ SUCCESS ]
REDIRECT:topic hsa_pathwayCommons_ENSEMBL -> mapping.html [ SUCCESS ]
REDIRECT:topic mmu_pathwayCommons_ENTREZID -> mapping.html [ SUCCESS ]
REDIRECT:topic KO_pathway.id -> mapping.html [ SUCCESS ]
REDIRECT:topic KO_pathwayCommons -> mapping.html [ SUCCESS ]
REDIRECT:topic SYMBOL_pathway.id -> mapping.html [ SUCCESS ]
REDIRECT:topic pathwayCommons_SYMBOL -> mapping.html [ SUCCESS ]
REDIRECT:topic chebi_pathwayCommons -> mapping.html [ SUCCESS ]
REDIRECT:topic mmu_pathwayCommons_ENSEMBL -> mapping.html [ SUCCESS ]
REDIRECT:topic hsa_ENTREZID_pathwayCommons -> mapping.html [ SUCCESS ]
pathway.completeness.cutoff.info html
REDIRECT:topic pathway.completeness.cutoff.info -> pathway.completeness.cutoff.info.html [ SUCCESS ]
pathway.species.pct_Mapped html
REDIRECT:topic pathway.species.pct_Mapped -> pathway.species.pct_Mapped.html [ SUCCESS ]
sbgn.xmls html
REDIRECT:topic sbgn.xmls -> sbgn.xmls.html [ SUCCESS ]
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'SBGNview.data' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'SBGNview.data' as SBGNview.data_1.5.0.zip
* DONE (SBGNview.data)
* installing to library 'D:/biocbuild/bbs-3.13-bioc/R/library'
package 'SBGNview.data' successfully unpacked and MD5 sums checked