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### Running command:
###
###   D:\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD check --force-multiarch --install=check:RegParallel.install-out.txt --library=D:\biocbuild\bbs-3.13-bioc\R\library --no-vignettes --timings RegParallel_1.9.0.tar.gz
###
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* using log directory 'D:/biocbuild/bbs-3.13-data-experiment/meat/RegParallel.Rcheck'
* using R Under development (unstable) (2020-12-30 r79736)
* using platform: x86_64-w64-mingw32 (64-bit)
* using session charset: ISO8859-1
* using option '--no-vignettes'
* checking for file 'RegParallel/DESCRIPTION' ... OK
* checking extension type ... Package
* this is package 'RegParallel' version '1.9.0'
* checking package namespace information ... OK
* checking package dependencies ... NOTE
Depends: includes the non-default packages:
  'doParallel', 'foreach', 'parallel', 'iterators', 'data.table',
  'stringr', 'survival', 'arm'
Adding so many packages to the search path is excessive and importing
selectively is preferable.
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking whether package 'RegParallel' can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking 'build' directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* loading checks for arch 'i386'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
* loading checks for arch 'x64'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking files in 'vignettes' ... OK
* checking examples ...
** running examples for arch 'i386' ... OK
Examples with CPU (user + system) or elapsed time > 5s
                  user system elapsed
RegParallel      25.74   0.18   35.51
bayesglmParallel 17.44   0.00   17.58
glmParallel       0.97   0.08    9.57
** running examples for arch 'x64' ... OK
Examples with CPU (user + system) or elapsed time > 5s
                  user system elapsed
RegParallel      27.00   0.22   37.15
bayesglmParallel 18.64   0.04   18.80
glmParallel       0.98   0.04   10.14
* checking for unstated dependencies in 'tests' ... OK
* checking tests ...
** running tests for arch 'i386' ...
  Running 'runTests.R'
 OK
** running tests for arch 'x64' ...
  Running 'runTests.R'
 OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes in 'inst/doc' ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignette outputs ... SKIPPED
* checking PDF version of manual ... OK
* DONE

Status: 1 NOTE
See
  'D:/biocbuild/bbs-3.13-data-experiment/meat/RegParallel.Rcheck/00check.log'
for details.

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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O http://172.29.0.4/BBS/3.13/data-experiment/src/contrib/RegParallel_1.9.0.tar.gz && rm -rf RegParallel.buildbin-libdir && mkdir RegParallel.buildbin-libdir && D:\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=RegParallel.buildbin-libdir RegParallel_1.9.0.tar.gz && D:\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL RegParallel_1.9.0.zip && rm RegParallel_1.9.0.tar.gz RegParallel_1.9.0.zip
###
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  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
100  166k  100  166k    0     0  1424k      0 --:--:-- --:--:-- --:--:-- 1437k

install for i386

* installing *source* package 'RegParallel' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'RegParallel'
    finding HTML links ... done
    RegParallel-package                     html  
REDIRECT:file	 RegParallel-package.html -> RegParallel-package.html [ SUCCESS ]
    RegParallel                             html  
REDIRECT:topic	 RegParallel -> RegParallel.html [ SUCCESS ]
    finding level-2 HTML links ... done

    bayesglmParallel                        html  
REDIRECT:topic	 bayesglmParallel -> bayesglmParallel.html [ SUCCESS ]
    clogitParallel                          html  
REDIRECT:topic	 clogitParallel -> clogitParallel.html [ SUCCESS ]
    coxphParallel                           html  
REDIRECT:topic	 coxphParallel -> coxphParallel.html [ SUCCESS ]
    glmParallel                             html  
REDIRECT:topic	 glmParallel -> glmParallel.html [ SUCCESS ]
    lmParallel                              html  
REDIRECT:topic	 lmParallel -> lmParallel.html [ SUCCESS ]
    svyglmParallel                          html  
REDIRECT:topic	 svyglmParallel -> svyglmParallel.html [ SUCCESS ]
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'RegParallel' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'RegParallel' as RegParallel_1.9.0.zip
* DONE (RegParallel)
* installing to library 'D:/biocbuild/bbs-3.13-bioc/R/library'
package 'RegParallel' successfully unpacked and MD5 sums checked