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###
### Running command:
###
###   D:\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD check --force-multiarch --install=check:ReactomeGSA.data.install-out.txt --library=D:\biocbuild\bbs-3.13-bioc\R\library --no-vignettes --timings ReactomeGSA.data_1.5.0.tar.gz
###
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* using log directory 'D:/biocbuild/bbs-3.13-data-experiment/meat/ReactomeGSA.data.Rcheck'
* using R Under development (unstable) (2020-12-30 r79736)
* using platform: x86_64-w64-mingw32 (64-bit)
* using session charset: ISO8859-1
* using option '--no-vignettes'
* checking for file 'ReactomeGSA.data/DESCRIPTION' ... OK
* checking extension type ... Package
* this is package 'ReactomeGSA.data' version '1.5.0'
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking whether package 'ReactomeGSA.data' can be installed ... OK
* checking installed package size ... NOTE
  installed size is 12.8Mb
  sub-directories of 1Mb or more:
    data  12.7Mb
* checking package directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* loading checks for arch 'i386'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
* loading checks for arch 'x64'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
* checking dependencies in R code ... NOTE
Packages in Depends field not imported from:
  'ReactomeGSA' 'Seurat' 'edgeR' 'limma'
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of 'data' directory ... OK
* checking data for non-ASCII characters ... NOTE
  Note: found 2 marked UTF-8 strings
* checking data for ASCII and uncompressed saves ... OK
* checking examples ... NONE
* checking PDF version of manual ... OK
* DONE

Status: 3 NOTEs
See
  'D:/biocbuild/bbs-3.13-data-experiment/meat/ReactomeGSA.data.Rcheck/00check.log'
for details.

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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O http://172.29.0.4/BBS/3.13/data-experiment/src/contrib/ReactomeGSA.data_1.5.0.tar.gz && rm -rf ReactomeGSA.data.buildbin-libdir && mkdir ReactomeGSA.data.buildbin-libdir && D:\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=ReactomeGSA.data.buildbin-libdir ReactomeGSA.data_1.5.0.tar.gz && D:\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL ReactomeGSA.data_1.5.0.zip && rm ReactomeGSA.data_1.5.0.tar.gz ReactomeGSA.data_1.5.0.zip
###
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  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
100 12.7M  100 12.7M    0     0  61.9M      0 --:--:-- --:--:-- --:--:-- 61.9M

install for i386

* installing *source* package 'ReactomeGSA.data' ...
** using staged installation
** R
** data
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'ReactomeGSA.data'
    finding HTML links ... done
    griss_melanoma_proteomics               html  
REDIRECT:topic	 griss_melanoma_proteomics -> griss_melanoma_proteomics.html [ SUCCESS ]
    griss_melanoma_result                   html  
REDIRECT:topic	 griss_melanoma_result -> griss_melanoma_result.html [ SUCCESS ]
    griss_melanoma_rnaseq                   html  
REDIRECT:topic	 griss_melanoma_rnaseq -> griss_melanoma_rnaseq.html [ SUCCESS ]
    jerby_b_cells                           html  
REDIRECT:topic	 jerby_b_cells -> jerby_b_cells.html [ SUCCESS ]
** building package indices
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'ReactomeGSA.data' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'ReactomeGSA.data' as ReactomeGSA.data_1.5.0.zip
* DONE (ReactomeGSA.data)
* installing to library 'D:/biocbuild/bbs-3.13-bioc/R/library'
package 'ReactomeGSA.data' successfully unpacked and MD5 sums checked