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INSTALL report for RTCGA.PANCAN12 on riesling1

This page was generated on 2021-01-14 15:59:11 -0500 (Thu, 14 Jan 2021).

TO THE DEVELOPERS/MAINTAINERS OF THE RTCGA.PANCAN12 PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page.
Package 316/385HostnameOS / ArchINSTALLBUILDCHECK
RTCGA.PANCAN12 1.19.0
Marcin Kosinski
Snapshot Date: 2021-01-14 09:00:13 -0500 (Thu, 14 Jan 2021)
URL: https://git.bioconductor.org/packages/RTCGA.PANCAN12
Branch: master
Last Commit: 062e24d
Last Changed Date: 2020-10-27 10:16:56 -0500 (Tue, 27 Oct 2020)
malbec2 Linux (Ubuntu 20.04.1 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
riesling1 Windows Server 2019 Standard / x64 [ OK ] OK  OK 

Summary

Package: RTCGA.PANCAN12
Version: 1.19.0
Command: C:\cygwin\bin\curl.exe -O http://172.29.0.4/BBS/3.13/data-experiment/src/contrib/RTCGA.PANCAN12_1.19.0.tar.gz && rm -rf RTCGA.PANCAN12.buildbin-libdir && mkdir RTCGA.PANCAN12.buildbin-libdir && D:\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=RTCGA.PANCAN12.buildbin-libdir RTCGA.PANCAN12_1.19.0.tar.gz && D:\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL RTCGA.PANCAN12_1.19.0.zip && rm RTCGA.PANCAN12_1.19.0.tar.gz RTCGA.PANCAN12_1.19.0.zip
StartedAt: 2021-01-14 10:16:30 -0500 (Thu, 14 Jan 2021)
EndedAt: 2021-01-14 10:17:20 -0500 (Thu, 14 Jan 2021)
EllapsedTime: 49.5 seconds
RetCode: 0
Status:  OK  

Command output

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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O http://172.29.0.4/BBS/3.13/data-experiment/src/contrib/RTCGA.PANCAN12_1.19.0.tar.gz && rm -rf RTCGA.PANCAN12.buildbin-libdir && mkdir RTCGA.PANCAN12.buildbin-libdir && D:\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=RTCGA.PANCAN12.buildbin-libdir RTCGA.PANCAN12_1.19.0.tar.gz && D:\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL RTCGA.PANCAN12_1.19.0.zip && rm RTCGA.PANCAN12_1.19.0.tar.gz RTCGA.PANCAN12_1.19.0.zip
###
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  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
  0  213M    0  1212    0     0   1317      0 47:18:20 --:--:-- 47:18:20  1315
 31  213M   31 67.5M    0     0  36.2M      0  0:00:05  0:00:01  0:00:04 36.2M
 38  213M   38 81.9M    0     0  27.5M      0  0:00:07  0:00:02  0:00:05 27.5M
 77  213M   77  165M    0     0  42.7M      0  0:00:04  0:00:03  0:00:01 42.7M
100  213M  100  213M    0     0  49.0M      0  0:00:04  0:00:04 --:--:-- 49.0M

install for i386

* installing *source* package 'RTCGA.PANCAN12' ...
** using staged installation
** R
** data
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'RTCGA.PANCAN12'
    finding HTML links ... done
    pancan12                                html  
REDIRECT:topic	 clinical.cb -> pancan12.html [ SUCCESS ]
REDIRECT:topic	 cnv.cb -> pancan12.html [ SUCCESS ]
REDIRECT:topic	 cnv.cb, -> pancan12.html [ SUCCESS ]
REDIRECT:topic	 expression.cb, -> pancan12.html [ SUCCESS ]
REDIRECT:topic	 expression.cb1 -> pancan12.html [ SUCCESS ]
REDIRECT:topic	 expression.cb2 -> pancan12.html [ SUCCESS ]
REDIRECT:topic	 mutation.cb -> pancan12.html [ SUCCESS ]
REDIRECT:topic	 mutation.cb, -> pancan12.html [ SUCCESS ]
REDIRECT:topic	 pancan12 -> pancan12.html [ SUCCESS ]
    finding level-2 HTML links ... done

** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'RTCGA.PANCAN12' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'RTCGA.PANCAN12' as RTCGA.PANCAN12_1.19.0.zip
* DONE (RTCGA.PANCAN12)
* installing to library 'D:/biocbuild/bbs-3.13-bioc/R/library'
package 'RTCGA.PANCAN12' successfully unpacked and MD5 sums checked