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CHECK report for RMassBankData on riesling1

This page was generated on 2021-01-11 15:59:33 -0500 (Mon, 11 Jan 2021).

TO THE DEVELOPERS/MAINTAINERS OF THE RMassBankData PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page.
Package 297/385HostnameOS / ArchINSTALLBUILDCHECK
RMassBankData 1.29.0
Michael Stravs, Emma Schymanski
Snapshot Date: 2021-01-11 09:00:09 -0500 (Mon, 11 Jan 2021)
URL: https://git.bioconductor.org/packages/RMassBankData
Branch: master
Last Commit: ac7d85c
Last Changed Date: 2020-10-27 09:56:34 -0500 (Tue, 27 Oct 2020)
malbec2 Linux (Ubuntu 20.04.1 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
riesling1 Windows Server 2019 Standard / x64  OK  OK [ OK ]

Summary

Package: RMassBankData
Version: 1.29.0
Command: D:\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD check --force-multiarch --install=check:RMassBankData.install-out.txt --library=D:\biocbuild\bbs-3.13-bioc\R\library --no-vignettes --timings RMassBankData_1.29.0.tar.gz
StartedAt: 2021-01-11 11:42:41 -0500 (Mon, 11 Jan 2021)
EndedAt: 2021-01-11 11:43:14 -0500 (Mon, 11 Jan 2021)
EllapsedTime: 32.5 seconds
RetCode: 0
Status:  OK  
CheckDir: RMassBankData.Rcheck
Warnings: 0

Command output

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###
### Running command:
###
###   D:\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD check --force-multiarch --install=check:RMassBankData.install-out.txt --library=D:\biocbuild\bbs-3.13-bioc\R\library --no-vignettes --timings RMassBankData_1.29.0.tar.gz
###
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* using log directory 'D:/biocbuild/bbs-3.13-data-experiment/meat/RMassBankData.Rcheck'
* using R Under development (unstable) (2020-12-30 r79736)
* using platform: x86_64-w64-mingw32 (64-bit)
* using session charset: ISO8859-1
* using option '--no-vignettes'
* checking for file 'RMassBankData/DESCRIPTION' ... OK
* checking extension type ... Package
* this is package 'RMassBankData' version '1.29.0'
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking whether package 'RMassBankData' can be installed ... OK
* checking installed package size ... NOTE
  installed size is 267.0Mb
  sub-directories of 1Mb or more:
    results   18.0Mb
    spectra  248.7Mb
* checking package directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* loading checks for arch 'i386'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
* loading checks for arch 'x64'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking examples ... NONE
* checking PDF version of manual ... OK
* DONE

Status: 1 NOTE
See
  'D:/biocbuild/bbs-3.13-data-experiment/meat/RMassBankData.Rcheck/00check.log'
for details.



Installation output

RMassBankData.Rcheck/00install.out

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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O http://172.29.0.4/BBS/3.13/data-experiment/src/contrib/RMassBankData_1.29.0.tar.gz && rm -rf RMassBankData.buildbin-libdir && mkdir RMassBankData.buildbin-libdir && D:\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=RMassBankData.buildbin-libdir RMassBankData_1.29.0.tar.gz && D:\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL RMassBankData_1.29.0.zip && rm RMassBankData_1.29.0.tar.gz RMassBankData_1.29.0.zip
###
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  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
  2 52.1M    2 1345k    0     0   908k      0  0:00:58  0:00:01  0:00:57  908k
  4 52.1M    4 2221k    0     0  1024k      0  0:00:52  0:00:02  0:00:50 1024k
  6 52.1M    6 3213k    0     0  1008k      0  0:00:53  0:00:03  0:00:50 1007k
  9 52.1M    9 5163k    0     0  1199k      0  0:00:44  0:00:04  0:00:40 1199k
 11 52.1M   11 6274k    0     0  1192k      0  0:00:44  0:00:05  0:00:39 1241k
 13 52.1M   13 7477k    0     0  1207k      0  0:00:44  0:00:06  0:00:38 1301k
 16 52.1M   16 8833k    0     0  1231k      0  0:00:43  0:00:07  0:00:36 1320k
 19 52.1M   19 10.3M    0     0  1254k      0  0:00:42  0:00:08  0:00:34 1404k
 43 52.1M   43 22.6M    0     0  2529k      0  0:00:21  0:00:09  0:00:12 3709k
100 52.1M  100 52.1M    0     0  5349k      0  0:00:09  0:00:09 --:--:-- 9978k

install for i386

* installing *source* package 'RMassBankData' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'RMassBankData'
    finding HTML links ... done
    RMassBankData                           html  
REDIRECT:topic	 RMassBankData -> RMassBankData.html [ SUCCESS ]
** building package indices
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'RMassBankData' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'RMassBankData' as RMassBankData_1.29.0.zip
* DONE (RMassBankData)
* installing to library 'D:/biocbuild/bbs-3.13-bioc/R/library'
package 'RMassBankData' successfully unpacked and MD5 sums checked

Tests output


Example timings