Diego Diez
| Snapshot Date: 2021-01-21 09:00:14 -0500 (Thu, 21 Jan 2021) |
| URL: https://git.bioconductor.org/packages/PWMEnrich.Dmelanogaster.background |
| Branch: master |
| Last Commit: 364c36a |
| Last Changed Date: 2020-10-27 09:55:42 -0500 (Tue, 27 Oct 2020) |
| Back to Multiple platform build/check report for BioC 3.13 experimental data |
|
This page was generated on 2021-01-21 16:01:35 -0500 (Thu, 21 Jan 2021).
| TO THE DEVELOPERS/MAINTAINERS OF THE PWMEnrich.Dmelanogaster.background PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 280/386 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | ||||||
| PWMEnrich.Dmelanogaster.background 4.25.0 Diego Diez
| malbec2 | Linux (Ubuntu 20.04.1 LTS) / x86_64 | OK | OK | WARNINGS | | |||||
| riesling1 | Windows Server 2019 Standard / x64 | OK | OK | [ WARNINGS ] |
| Package: PWMEnrich.Dmelanogaster.background |
| Version: 4.25.0 |
| Command: D:\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD check --force-multiarch --install=check:PWMEnrich.Dmelanogaster.background.install-out.txt --library=D:\biocbuild\bbs-3.13-bioc\R\library --no-vignettes --timings PWMEnrich.Dmelanogaster.background_4.25.0.tar.gz |
| StartedAt: 2021-01-21 11:40:57 -0500 (Thu, 21 Jan 2021) |
| EndedAt: 2021-01-21 11:42:16 -0500 (Thu, 21 Jan 2021) |
| EllapsedTime: 79.3 seconds |
| RetCode: 0 |
| Status: WARNINGS |
| CheckDir: PWMEnrich.Dmelanogaster.background.Rcheck |
| Warnings: 1 |
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### Running command:
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### D:\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD check --force-multiarch --install=check:PWMEnrich.Dmelanogaster.background.install-out.txt --library=D:\biocbuild\bbs-3.13-bioc\R\library --no-vignettes --timings PWMEnrich.Dmelanogaster.background_4.25.0.tar.gz
###
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* using log directory 'D:/biocbuild/bbs-3.13-data-experiment/meat/PWMEnrich.Dmelanogaster.background.Rcheck'
* using R Under development (unstable) (2020-12-30 r79736)
* using platform: x86_64-w64-mingw32 (64-bit)
* using session charset: ISO8859-1
* using option '--no-vignettes'
* checking for file 'PWMEnrich.Dmelanogaster.background/DESCRIPTION' ... OK
* checking extension type ... Package
* this is package 'PWMEnrich.Dmelanogaster.background' version '4.25.0'
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking whether package 'PWMEnrich.Dmelanogaster.background' can be installed ... OK
* checking installed package size ... NOTE
installed size is 7.9Mb
sub-directories of 1Mb or more:
data 7.8Mb
* checking package directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* loading checks for arch 'i386'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
* loading checks for arch 'x64'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of 'data' directory ... OK
* checking data for non-ASCII characters ... OK
* checking data for ASCII and uncompressed saves ... WARNING
Note: significantly better compression could be obtained
by using R CMD build --resave-data
old_size new_size compress
MotifDb.Dmel.PFM.RData 43Kb 29Kb xz
MotifDb.Dmel.RData 178Kb 123Kb xz
PWMCutoff4.dm3.MotifDb.Dmel.RData 173Kb 115Kb xz
PWMCutoff5.dm3.MotifDb.Dmel.RData 172Kb 115Kb xz
PWMLogn.dm3.MotifDb.Dmel.RData 199Kb 135Kb xz
PWMPvalueCutoff1e2.dm3.MotifDb.Dmel.RData 182Kb 119Kb xz
PWMPvalueCutoff1e3.dm3.MotifDb.Dmel.RData 181Kb 118Kb xz
PWMPvalueCutoff1e4.dm3.MotifDb.Dmel.RData 181Kb 117Kb xz
dm3.upstream2000.RData 6.5Mb 5.7Mb xz
* checking examples ...
** running examples for arch 'i386' ... OK
** running examples for arch 'x64' ... OK
* checking PDF version of manual ... OK
* DONE
Status: 1 WARNING, 1 NOTE
See
'D:/biocbuild/bbs-3.13-data-experiment/meat/PWMEnrich.Dmelanogaster.background.Rcheck/00check.log'
for details.
PWMEnrich.Dmelanogaster.background.Rcheck/00install.out
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###
### Running command:
###
### C:\cygwin\bin\curl.exe -O http://172.29.0.4/BBS/3.13/data-experiment/src/contrib/PWMEnrich.Dmelanogaster.background_4.25.0.tar.gz && rm -rf PWMEnrich.Dmelanogaster.background.buildbin-libdir && mkdir PWMEnrich.Dmelanogaster.background.buildbin-libdir && D:\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=PWMEnrich.Dmelanogaster.background.buildbin-libdir PWMEnrich.Dmelanogaster.background_4.25.0.tar.gz && D:\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL PWMEnrich.Dmelanogaster.background_4.25.0.zip && rm PWMEnrich.Dmelanogaster.background_4.25.0.tar.gz PWMEnrich.Dmelanogaster.background_4.25.0.zip
###
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% Total % Received % Xferd Average Speed Time Time Time Current
Dload Upload Total Spent Left Speed
0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0
100 7924k 100 7924k 0 0 31.4M 0 --:--:-- --:--:-- --:--:-- 31.5M
install for i386
* installing *source* package 'PWMEnrich.Dmelanogaster.background' ...
** using staged installation
** data
** inst
** help
*** installing help indices
converting help for package 'PWMEnrich.Dmelanogaster.background'
finding HTML links ... done
PWMEnrich.Dmelanogster.background-package
html
REDIRECT:topic PWMEnrich.Dmelanogaster.background-package -> PWMEnrich.Dmelanogster.background-package.html [ SUCCESS ]
REDIRECT:topic PWMEnrich.Dmelanogaster.background -> PWMEnrich.Dmelanogster.background-package.html [ SUCCESS ]
REDIRECT:topic MotifDb.Dmel.PFM -> PWMEnrich.Dmelanogster.background-package.html [ SUCCESS ]
REDIRECT:topic MotifDb.Dmel -> PWMEnrich.Dmelanogster.background-package.html [ SUCCESS ]
REDIRECT:topic PWMLogn.dm3.MotifDb.Dmel -> PWMEnrich.Dmelanogster.background-package.html [ SUCCESS ]
REDIRECT:topic PWMCutoff4.dm3.MotifDb.Dmel -> PWMEnrich.Dmelanogster.background-package.html [ SUCCESS ]
REDIRECT:topic PWMCutoff5.dm3.MotifDb.Dmel -> PWMEnrich.Dmelanogster.background-package.html [ SUCCESS ]
REDIRECT:topic PWMPvalueCutoff1e2.dm3.MotifDb.Dmel -> PWMEnrich.Dmelanogster.background-package.html [ SUCCESS ]
REDIRECT:topic PWMPvalueCutoff1e3.dm3.MotifDb.Dmel -> PWMEnrich.Dmelanogster.background-package.html [ SUCCESS ]
REDIRECT:topic PWMPvalueCutoff1e4.dm3.MotifDb.Dmel -> PWMEnrich.Dmelanogster.background-package.html [ SUCCESS ]
REDIRECT:topic dm3.upstream2000 -> PWMEnrich.Dmelanogster.background-package.html [ SUCCESS ]
REDIRECT:file PWMEnrich.Dmelanogster.background-package.html -> PWMEnrich.Dmelanogster.background-package.html [ SUCCESS ]
finding level-2 HTML links ... done
** building package indices
** testing if installed package can be loaded from temporary location
Warning: replacing previous import 'Biostrings::pattern' by 'grid::pattern' when loading 'PWMEnrich'
** testing if installed package can be loaded from final location
Warning: replacing previous import 'Biostrings::pattern' by 'grid::pattern' when loading 'PWMEnrich'
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'PWMEnrich.Dmelanogaster.background' ...
** testing if installed package can be loaded
Warning: replacing previous import 'Biostrings::pattern' by 'grid::pattern' when loading 'PWMEnrich'
* MD5 sums
packaged installation of 'PWMEnrich.Dmelanogaster.background' as PWMEnrich.Dmelanogaster.background_4.25.0.zip
* DONE (PWMEnrich.Dmelanogaster.background)
* installing to library 'D:/biocbuild/bbs-3.13-bioc/R/library'
package 'PWMEnrich.Dmelanogaster.background' successfully unpacked and MD5 sums checked
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PWMEnrich.Dmelanogaster.background.Rcheck/examples_i386/PWMEnrich.Dmelanogaster.background-Ex.timings
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PWMEnrich.Dmelanogaster.background.Rcheck/examples_x64/PWMEnrich.Dmelanogaster.background-Ex.timings
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