Back to Build/check report for BioC 3.13 experimental data
ABCDEFGHIJKLMNO[P]QRSTUVWXYZ

This page was generated on 2021-10-16 15:58:43 -0400 (Sat, 16 Oct 2021).

CHECK results for PWMEnrich.Dmelanogaster.background on malbec2

To the developers/maintainers of the PWMEnrich.Dmelanogaster.background package:
Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 295/406HostnameOS / ArchINSTALLBUILDCHECK
PWMEnrich.Dmelanogaster.background 4.26.1  (landing page)
Diego Diez
Snapshot Date: 2021-10-16 09:30:07 -0400 (Sat, 16 Oct 2021)
git_url: https://git.bioconductor.org/packages/PWMEnrich.Dmelanogaster.background
git_branch: RELEASE_3_13
git_last_commit: a61fc38
git_last_commit_date: 2021-05-25 22:21:36 -0400 (Tue, 25 May 2021)
malbec2Linux (Ubuntu 20.04.2 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published

Summary

Package: PWMEnrich.Dmelanogaster.background
Version: 4.26.1
Command: /home/biocbuild/bbs-3.13-bioc/R/bin/R CMD check --install=check:PWMEnrich.Dmelanogaster.background.install-out.txt --library=/home/biocbuild/bbs-3.13-bioc/R/library --no-vignettes --timings PWMEnrich.Dmelanogaster.background_4.26.1.tar.gz
StartedAt: 2021-10-16 13:47:43 -0400 (Sat, 16 Oct 2021)
EndedAt: 2021-10-16 13:48:18 -0400 (Sat, 16 Oct 2021)
EllapsedTime: 34.8 seconds
RetCode: 0
Status:   OK  
CheckDir: PWMEnrich.Dmelanogaster.background.Rcheck
Warnings: 0

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   /home/biocbuild/bbs-3.13-bioc/R/bin/R CMD check --install=check:PWMEnrich.Dmelanogaster.background.install-out.txt --library=/home/biocbuild/bbs-3.13-bioc/R/library --no-vignettes --timings PWMEnrich.Dmelanogaster.background_4.26.1.tar.gz
###
##############################################################################
##############################################################################


* using log directory ‘/home/biocbuild/bbs-3.13-data-experiment/meat/PWMEnrich.Dmelanogaster.background.Rcheck’
* using R version 4.1.1 (2021-08-10)
* using platform: x86_64-pc-linux-gnu (64-bit)
* using session charset: UTF-8
* using option ‘--no-vignettes’
* checking for file ‘PWMEnrich.Dmelanogaster.background/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘PWMEnrich.Dmelanogaster.background’ version ‘4.26.1’
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... NOTE
Found the following hidden files and directories:
  .git_fetch_output.txt
  .git_merge_output.txt
These were most likely included in error. See section ‘Package
structure’ in the ‘Writing R Extensions’ manual.
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘PWMEnrich.Dmelanogaster.background’ can be installed ... OK
* checking installed package size ... NOTE
  installed size is  6.6Mb
  sub-directories of 1Mb or more:
    data   6.6Mb
* checking package directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of ‘data’ directory ... OK
* checking data for non-ASCII characters ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking examples ... OK
* checking PDF version of manual ... OK
* DONE

Status: 2 NOTEs
See
  ‘/home/biocbuild/bbs-3.13-data-experiment/meat/PWMEnrich.Dmelanogaster.background.Rcheck/00check.log’
for details.



Installation output

PWMEnrich.Dmelanogaster.background.Rcheck/00install.out

##############################################################################
##############################################################################
###
### Running command:
###
###   /home/biocbuild/bbs-3.13-bioc/R/bin/R CMD INSTALL PWMEnrich.Dmelanogaster.background
###
##############################################################################
##############################################################################


* installing to library ‘/home/biocbuild/bbs-3.13-bioc/R/library’
* installing *source* package ‘PWMEnrich.Dmelanogaster.background’ ...
** using staged installation
** data
** inst
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (PWMEnrich.Dmelanogaster.background)

Tests output


Example timings

PWMEnrich.Dmelanogaster.background.Rcheck/PWMEnrich.Dmelanogaster.background-Ex.timings

nameusersystemelapsed
PWMEnrich.Dmelanogster.background-package1.1130.0321.145