Back to Multiple platform build/check report for BioC 3.13 experimental data |
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This page was generated on 2021-01-21 16:01:32 -0500 (Thu, 21 Jan 2021).
TO THE DEVELOPERS/MAINTAINERS OF THE NCIgraphData PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page. |
Package 247/386 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | ||||||
NCIgraphData 1.27.0 Laurent Jacob
| malbec2 | Linux (Ubuntu 20.04.1 LTS) / x86_64 | OK | OK | WARNINGS | ![]() | |||||
riesling1 | Windows Server 2019 Standard / x64 | OK | OK | [ WARNINGS ] |
Package: NCIgraphData |
Version: 1.27.0 |
Command: D:\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD check --force-multiarch --install=check:NCIgraphData.install-out.txt --library=D:\biocbuild\bbs-3.13-bioc\R\library --no-vignettes --timings NCIgraphData_1.27.0.tar.gz |
StartedAt: 2021-01-21 11:37:28 -0500 (Thu, 21 Jan 2021) |
EndedAt: 2021-01-21 11:38:22 -0500 (Thu, 21 Jan 2021) |
EllapsedTime: 54.1 seconds |
RetCode: 0 |
Status: WARNINGS |
CheckDir: NCIgraphData.Rcheck |
Warnings: 1 |
############################################################################## ############################################################################## ### ### Running command: ### ### D:\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD check --force-multiarch --install=check:NCIgraphData.install-out.txt --library=D:\biocbuild\bbs-3.13-bioc\R\library --no-vignettes --timings NCIgraphData_1.27.0.tar.gz ### ############################################################################## ############################################################################## * using log directory 'D:/biocbuild/bbs-3.13-data-experiment/meat/NCIgraphData.Rcheck' * using R Under development (unstable) (2020-12-30 r79736) * using platform: x86_64-w64-mingw32 (64-bit) * using session charset: ISO8859-1 * using option '--no-vignettes' * checking for file 'NCIgraphData/DESCRIPTION' ... OK * this is package 'NCIgraphData' version '1.27.0' * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking whether package 'NCIgraphData' can be installed ... OK * checking installed package size ... NOTE installed size is 5.4Mb sub-directories of 1Mb or more: data 5.3Mb * checking package directory ... OK * checking DESCRIPTION meta-information ... NOTE Malformed Description field: should contain one or more complete sentences. * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * loading checks for arch 'i386' ** checking whether the package can be loaded ... OK ** checking whether the package can be loaded with stated dependencies ... OK ** checking whether the package can be unloaded cleanly ... OK ** checking whether the namespace can be loaded with stated dependencies ... OK ** checking whether the namespace can be unloaded cleanly ... OK * loading checks for arch 'x64' ** checking whether the package can be loaded ... OK ** checking whether the package can be loaded with stated dependencies ... OK ** checking whether the package can be unloaded cleanly ... OK ** checking whether the namespace can be loaded with stated dependencies ... OK ** checking whether the namespace can be unloaded cleanly ... OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking contents of 'data' directory ... OK * checking data for non-ASCII characters ... OK * checking data for ASCII and uncompressed saves ... WARNING Note: significantly better compression could be obtained by using R CMD build --resave-data old_size new_size compress NCI-cyList.RData 4.3Mb 2.0Mb xz reactome-cyList.RData 1.1Mb 558Kb xz * checking examples ... ** running examples for arch 'i386' ... OK ** running examples for arch 'x64' ... OK * checking PDF version of manual ... OK * DONE Status: 1 WARNING, 2 NOTEs See 'D:/biocbuild/bbs-3.13-data-experiment/meat/NCIgraphData.Rcheck/00check.log' for details.
NCIgraphData.Rcheck/00install.out
############################################################################## ############################################################################## ### ### Running command: ### ### C:\cygwin\bin\curl.exe -O http://172.29.0.4/BBS/3.13/data-experiment/src/contrib/NCIgraphData_1.27.0.tar.gz && rm -rf NCIgraphData.buildbin-libdir && mkdir NCIgraphData.buildbin-libdir && D:\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=NCIgraphData.buildbin-libdir NCIgraphData_1.27.0.tar.gz && D:\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL NCIgraphData_1.27.0.zip && rm NCIgraphData_1.27.0.tar.gz NCIgraphData_1.27.0.zip ### ############################################################################## ############################################################################## % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 100 5379k 100 5379k 0 0 9870k 0 --:--:-- --:--:-- --:--:-- 9870k install for i386 * installing *source* package 'NCIgraphData' ... ** using staged installation ** data *** moving datasets to lazyload DB ** help *** installing help indices converting help for package 'NCIgraphData' finding HTML links ... done NCI.cyList html REDIRECT:topic NCI.cyList -> NCI.cyList.html [ SUCCESS ] reactome.cyList html REDIRECT:topic reactome.cyList -> reactome.cyList.html [ SUCCESS ] ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'NCIgraphData' ... ** testing if installed package can be loaded * MD5 sums packaged installation of 'NCIgraphData' as NCIgraphData_1.27.0.zip * DONE (NCIgraphData) * installing to library 'D:/biocbuild/bbs-3.13-bioc/R/library' package 'NCIgraphData' successfully unpacked and MD5 sums checked
NCIgraphData.Rcheck/examples_i386/NCIgraphData-Ex.timings
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NCIgraphData.Rcheck/examples_x64/NCIgraphData-Ex.timings
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