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INSTALL report for HMP16SData on riesling1

This page was generated on 2021-01-11 15:59:31 -0500 (Mon, 11 Jan 2021).

TO THE DEVELOPERS/MAINTAINERS OF THE HMP16SData PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page.
Package 177/385HostnameOS / ArchINSTALLBUILDCHECK
HMP16SData 1.11.0
Lucas Schiffer
Snapshot Date: 2021-01-11 09:00:09 -0500 (Mon, 11 Jan 2021)
URL: https://git.bioconductor.org/packages/HMP16SData
Branch: master
Last Commit: 092364b
Last Changed Date: 2020-10-27 10:24:33 -0500 (Tue, 27 Oct 2020)
malbec2 Linux (Ubuntu 20.04.1 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
riesling1 Windows Server 2019 Standard / x64 [ OK ] OK  WARNINGS 

Summary

Package: HMP16SData
Version: 1.11.0
Command: C:\cygwin\bin\curl.exe -O http://172.29.0.4/BBS/3.13/data-experiment/src/contrib/HMP16SData_1.11.0.tar.gz && rm -rf HMP16SData.buildbin-libdir && mkdir HMP16SData.buildbin-libdir && D:\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=HMP16SData.buildbin-libdir HMP16SData_1.11.0.tar.gz && D:\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL HMP16SData_1.11.0.zip && rm HMP16SData_1.11.0.tar.gz HMP16SData_1.11.0.zip
StartedAt: 2021-01-11 10:17:04 -0500 (Mon, 11 Jan 2021)
EndedAt: 2021-01-11 10:17:53 -0500 (Mon, 11 Jan 2021)
EllapsedTime: 49.0 seconds
RetCode: 0
Status:  OK  

Command output

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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O http://172.29.0.4/BBS/3.13/data-experiment/src/contrib/HMP16SData_1.11.0.tar.gz && rm -rf HMP16SData.buildbin-libdir && mkdir HMP16SData.buildbin-libdir && D:\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=HMP16SData.buildbin-libdir HMP16SData_1.11.0.tar.gz && D:\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL HMP16SData_1.11.0.zip && rm HMP16SData_1.11.0.tar.gz HMP16SData_1.11.0.zip
###
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  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
  0 15.5M    0  1214    0     0   1157      0  3:54:21  0:00:01  3:54:20  1157
 36 15.5M   36 5731k    0     0  3728k      0  0:00:04  0:00:01  0:00:03 3728k
100 15.5M  100 15.5M    0     0  8052k      0  0:00:01  0:00:01 --:--:-- 8052k

install for i386

* installing *source* package 'HMP16SData' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'HMP16SData'
    finding HTML links ... done
    HMP16SData                              html  
REDIRECT:topic	 HMP16SData -> HMP16SData.html [ SUCCESS ]
    V13                                     html  
REDIRECT:topic	 V13 -> V13.html [ SUCCESS ]
    V35                                     html  
REDIRECT:topic	 V35 -> V35.html [ SUCCESS ]
    as_phyloseq                             html  
REDIRECT:topic	 as_phyloseq -> as_phyloseq.html [ SUCCESS ]
    attach_dbGaP                            html  
REDIRECT:topic	 attach_dbGaP -> attach_dbGaP.html [ SUCCESS ]
    dictionary                              html  
REDIRECT:topic	 dictionary -> dictionary.html [ SUCCESS ]
    kable_one                               html  
REDIRECT:topic	 kable_one -> kable_one.html [ SUCCESS ]
    reexports                               html  
REDIRECT:topic	 reexports -> reexports.html [ SUCCESS ]
REDIRECT:topic	 %>% -> reexports.html [ FAIL ]
Rd warning: cannot open file 'D:/biocbuild/bbs-3.13-data-experiment/meat/HMP16SData.buildbin-libdir/00LOCK-HMP16SData/00new/HMP16SData/help/%>%.html': Invalid argument
    table_one                               html  
REDIRECT:topic	 table_one -> table_one.html [ SUCCESS ]
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
snapshotDate(): 2021-01-07
** testing if installed package can be loaded from final location
snapshotDate(): 2021-01-07
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'HMP16SData' ...
** testing if installed package can be loaded
snapshotDate(): 2021-01-07
* MD5 sums
packaged installation of 'HMP16SData' as HMP16SData_1.11.0.zip
* DONE (HMP16SData)
* installing to library 'D:/biocbuild/bbs-3.13-bioc/R/library'
package 'HMP16SData' successfully unpacked and MD5 sums checked