Samuel Wieczorek
| Snapshot Date: 2021-01-14 09:00:13 -0500 (Thu, 14 Jan 2021) |
| URL: https://git.bioconductor.org/packages/DAPARdata |
| Branch: master |
| Last Commit: bc1bf19 |
| Last Changed Date: 2020-10-27 10:18:29 -0500 (Tue, 27 Oct 2020) |
| Back to Multiple platform build/check report for BioC 3.13 experimental data |
|
This page was generated on 2021-01-14 15:59:07 -0500 (Thu, 14 Jan 2021).
| TO THE DEVELOPERS/MAINTAINERS OF THE DAPARdata PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 88/385 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | ||||||
| DAPARdata 1.21.0 Samuel Wieczorek
| malbec2 | Linux (Ubuntu 20.04.1 LTS) / x86_64 | OK | OK | WARNINGS | | |||||
| riesling1 | Windows Server 2019 Standard / x64 | OK | OK | [ WARNINGS ] |
| Package: DAPARdata |
| Version: 1.21.0 |
| Command: D:\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD check --force-multiarch --install=check:DAPARdata.install-out.txt --library=D:\biocbuild\bbs-3.13-bioc\R\library --no-vignettes --timings DAPARdata_1.21.0.tar.gz |
| StartedAt: 2021-01-14 11:13:24 -0500 (Thu, 14 Jan 2021) |
| EndedAt: 2021-01-14 11:15:24 -0500 (Thu, 14 Jan 2021) |
| EllapsedTime: 120.0 seconds |
| RetCode: 0 |
| Status: WARNINGS |
| CheckDir: DAPARdata.Rcheck |
| Warnings: 1 |
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### Running command:
###
### D:\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD check --force-multiarch --install=check:DAPARdata.install-out.txt --library=D:\biocbuild\bbs-3.13-bioc\R\library --no-vignettes --timings DAPARdata_1.21.0.tar.gz
###
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* using log directory 'D:/biocbuild/bbs-3.13-data-experiment/meat/DAPARdata.Rcheck'
* using R Under development (unstable) (2020-12-30 r79736)
* using platform: x86_64-w64-mingw32 (64-bit)
* using session charset: ISO8859-1
* using option '--no-vignettes'
* checking for file 'DAPARdata/DESCRIPTION' ... OK
* checking extension type ... Package
* this is package 'DAPARdata' version '1.21.0'
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking whether package 'DAPARdata' can be installed ... OK
* checking installed package size ... NOTE
installed size is 50.4Mb
sub-directories of 1Mb or more:
data 10.4Mb
extdata 39.1Mb
* checking package directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* loading checks for arch 'i386'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
* loading checks for arch 'x64'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of 'data' directory ... OK
* checking data for non-ASCII characters ... OK
* checking data for ASCII and uncompressed saves ... WARNING
Note: significantly better compression could be obtained
by using R CMD build --resave-data
old_size new_size compress
Exp1_R25_pept.RData 2.3Mb 1.3Mb xz
Exp1_R25_prot.RData 1.1Mb 597Kb xz
Exp1_R2_pept.RData 1.3Mb 873Kb xz
Exp1_R2_prot.RData 1.1Mb 563Kb xz
Exp2_R100_pept.RData 1.0Mb 569Kb xz
Exp2_R100_prot.RData 558Kb 262Kb xz
Exp2_R10_pept.RData 1.0Mb 571Kb xz
Exp2_R10_prot.RData 563Kb 264Kb xz
Exp2_R2_pept.RData 1007Kb 550Kb xz
Exp2_R2_prot.RData 564Kb 259Kb xz
* checking installed files from 'inst/doc' ... OK
* checking examples ...
** running examples for arch 'i386' ... OK
** running examples for arch 'x64' ... OK
* checking PDF version of manual ... OK
* DONE
Status: 1 WARNING, 1 NOTE
See
'D:/biocbuild/bbs-3.13-data-experiment/meat/DAPARdata.Rcheck/00check.log'
for details.
DAPARdata.Rcheck/00install.out
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###
### Running command:
###
### C:\cygwin\bin\curl.exe -O http://172.29.0.4/BBS/3.13/data-experiment/src/contrib/DAPARdata_1.21.0.tar.gz && rm -rf DAPARdata.buildbin-libdir && mkdir DAPARdata.buildbin-libdir && D:\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=DAPARdata.buildbin-libdir DAPARdata_1.21.0.tar.gz && D:\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL DAPARdata_1.21.0.zip && rm DAPARdata_1.21.0.tar.gz DAPARdata_1.21.0.zip
###
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% Total % Received % Xferd Average Speed Time Time Time Current
Dload Upload Total Spent Left Speed
0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0
100 29.3M 100 29.3M 0 0 106M 0 --:--:-- --:--:-- --:--:-- 106M
install for i386
* installing *source* package 'DAPARdata' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'DAPARdata'
finding HTML links ... done
DAPARdata html
REDIRECT:topic DAPARdata -> DAPARdata.html [ SUCCESS ]
Exp1_R25_pept html
REDIRECT:topic Exp1_R25_pept -> Exp1_R25_pept.html [ SUCCESS ]
finding level-2 HTML links ... done
Exp1_R25_prot html
REDIRECT:topic Exp1_R25_prot -> Exp1_R25_prot.html [ SUCCESS ]
Exp1_R2_pept html
REDIRECT:topic Exp1_R2_pept -> Exp1_R2_pept.html [ SUCCESS ]
Exp1_R2_prot html
REDIRECT:topic Exp1_R2_prot -> Exp1_R2_prot.html [ SUCCESS ]
Exp2_R100_pept html
REDIRECT:topic Exp2_R100_pept -> Exp2_R100_pept.html [ SUCCESS ]
Exp2_R100_prot html
REDIRECT:topic Exp2_R100_prot -> Exp2_R100_prot.html [ SUCCESS ]
Exp2_R10_pept html
REDIRECT:topic Exp2_R10_pept -> Exp2_R10_pept.html [ SUCCESS ]
Exp2_R10_prot html
REDIRECT:topic Exp2_R10_prot -> Exp2_R10_prot.html [ SUCCESS ]
Exp2_R2_pept html
REDIRECT:topic Exp2_R2_pept -> Exp2_R2_pept.html [ SUCCESS ]
Exp2_R2_prot html
REDIRECT:topic Exp2_R2_prot -> Exp2_R2_prot.html [ SUCCESS ]
** building package indices
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'DAPARdata' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'DAPARdata' as DAPARdata_1.21.0.zip
* DONE (DAPARdata)
* installing to library 'D:/biocbuild/bbs-3.13-bioc/R/library'
package 'DAPARdata' successfully unpacked and MD5 sums checked
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DAPARdata.Rcheck/examples_i386/DAPARdata-Ex.timings
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DAPARdata.Rcheck/examples_x64/DAPARdata-Ex.timings
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