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### Running command:
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###   C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD check --force-multiarch --install=check:regutools.install-out.txt --library=C:\Users\biocbuild\bbs-3.13-bioc\R\library --no-vignettes --timings regutools_1.4.0.tar.gz
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* using log directory 'C:/Users/biocbuild/bbs-3.13-bioc/meat/regutools.Rcheck'
* using R version 4.1.1 (2021-08-10)
* using platform: x86_64-w64-mingw32 (64-bit)
* using session charset: ISO8859-1
* using option '--no-vignettes'
* checking for file 'regutools/DESCRIPTION' ... OK
* this is package 'regutools' version '1.4.0'
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking whether package 'regutools' can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking 'build' directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* loading checks for arch 'i386'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
* loading checks for arch 'x64'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking files in 'vignettes' ... OK
* checking examples ...
** running examples for arch 'i386' ... OK
Examples with CPU (user + system) or elapsed time > 5s
                        user system elapsed
plot_dna_objects       12.11   0.35   12.85
build_condition         9.22   1.08   11.17
convert_to_granges      9.11   0.39    9.88
convert_to_biostrings   8.51   0.89   16.40
get_dna_objects         8.30   0.65    9.70
get_gene_synonyms       7.86   0.70    8.96
connect_database        7.28   1.08    8.77
guess_id                7.89   0.37    8.64
get_regulatory_summary  7.91   0.33    8.59
get_dataset             7.93   0.29    8.59
list_datasets           7.68   0.34    8.37
get_regulatory_network  7.38   0.61    9.59
regulondb               7.01   0.87    8.26
get_binding_sites       7.43   0.32    8.86
list_attributes         7.45   0.30    8.11
get_gene_regulators     6.73   0.77    8.11
** running examples for arch 'x64' ... OK
Examples with CPU (user + system) or elapsed time > 5s
                        user system elapsed
plot_dna_objects       12.39   0.25   13.01
build_condition         8.35   0.64    9.61
connect_database        8.43   0.36    9.22
get_dna_objects         7.82   0.46    8.61
convert_to_granges      7.79   0.45    8.59
get_regulatory_network  7.59   0.42    9.64
convert_to_biostrings   7.59   0.39    8.38
get_regulatory_summary  7.47   0.41    8.24
get_dataset             7.51   0.29    8.19
list_attributes         7.37   0.33    8.08
get_binding_sites       7.09   0.42    7.88
get_gene_regulators     7.11   0.39    7.89
list_datasets           6.94   0.28    7.58
regulondb               6.99   0.22    7.55
guess_id                6.77   0.40    7.51
get_gene_synonyms       6.73   0.35    7.40
* checking for unstated dependencies in 'tests' ... OK
* checking tests ...
** running tests for arch 'i386' ...
  Running 'testthat.R'
 OK
** running tests for arch 'x64' ...
  Running 'testthat.R'
 OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes in 'inst/doc' ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignette outputs ... SKIPPED
* checking PDF version of manual ... OK
* DONE

Status: OK