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This page was generated on 2021-10-15 15:06:17 -0400 (Fri, 15 Oct 2021).

BUILD BIN results for qsea on tokay2

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- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/qsea.git to
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raw results

Package 1476/2041HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
qsea 1.18.0  (landing page)
Matthias Lienhard
Snapshot Date: 2021-10-14 04:50:12 -0400 (Thu, 14 Oct 2021)
git_url: https://git.bioconductor.org/packages/qsea
git_branch: RELEASE_3_13
git_last_commit: f23006b
git_last_commit_date: 2021-05-19 12:21:24 -0400 (Wed, 19 May 2021)
nebbiolo1Linux (Ubuntu 20.04.2 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
tokay2Windows Server 2012 R2 Standard / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
machv2macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published

Summary

Package: qsea
Version: 1.18.0
Command: rm -rf qsea.buildbin-libdir && mkdir qsea.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=qsea.buildbin-libdir qsea_1.18.0.tar.gz
StartedAt: 2021-10-15 11:10:27 -0400 (Fri, 15 Oct 2021)
EndedAt: 2021-10-15 11:11:57 -0400 (Fri, 15 Oct 2021)
EllapsedTime: 90.9 seconds
RetCode: 0
Status:   OK  
PackageFile: qsea_1.18.0.zip
PackageFileSize: 931.8 KiB

Command output

##############################################################################
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###
### Running command:
###
###   rm -rf qsea.buildbin-libdir && mkdir qsea.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=qsea.buildbin-libdir qsea_1.18.0.tar.gz
###
##############################################################################
##############################################################################



install for i386

* installing *source* package 'qsea' ...
** using staged installation
** libs
"C:/rtools40/mingw32/bin/"gcc  -I"C:/Users/BIOCBU~1/BBS-3~1.13-/R/include" -DNDEBUG     -I"c:/extsoft/include"     -O2 -Wall  -std=gnu99 -mfpmath=sse -msse2 -mstackrealign  -c lm.c -o lm.o
C:/rtools40/mingw32/bin/gcc -shared -s -static-libgcc -o qsea.dll tmp.def lm.o -Lc:/extsoft/lib/i386 -Lc:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.13-/R/bin/i386 -lR
installing to C:/Users/biocbuild/bbs-3.13-bioc/meat/qsea.buildbin-libdir/00LOCK-qsea/00new/qsea/libs/i386
** R
** inst
** preparing package for lazy loading
No methods found in package 'IRanges' for request: 'values' when loading 'qsea'
** help
*** installing help indices
  converting help for package 'qsea'
    finding HTML links ... done
    addCNV                                  html  
    addContrast                             html  
    addCoverage                             html  
    addEnrichmentParameters                 html  
    addLibraryFactors                       html  
    addNewSamples                           html  
    addOffset                               html  
    addPatternDensity                       html  
    addSeqPref                              html  
    createQseaSet                           html  
    example                                 html  
    fitNBglm                                html  
    getPCA                                  html  
    isSignificant                           html  
    makeTable                               html  
    normMethod                              html  
    plotCNV                                 html  
    plotCoverage                            html  
    plotEnrichmentProfile                   html  
    plotPCA                                 html  
    qsea-package                            html  
REDIRECT:topic	 Previous alias or file overwritten by alias: C:/Users/biocbuild/bbs-3.13-bioc/meat/qsea.buildbin-libdir/00LOCK-qsea/00new/qsea/help/QSEA.html
    qseaGLM-class                           html  
    qseaPCA-class                           html  
    qseaSet-class                           html  
    regionStats                             html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
No methods found in package 'IRanges' for request: 'values' when loading 'qsea'
** testing if installed package can be loaded from final location
No methods found in package 'IRanges' for request: 'values' when loading 'qsea'
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'qsea' ...
** libs
"C:/rtools40/mingw64/bin/"gcc  -I"C:/Users/BIOCBU~1/BBS-3~1.13-/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O2 -Wall  -std=gnu99 -mfpmath=sse -msse2 -mstackrealign  -c lm.c -o lm.o
C:/rtools40/mingw64/bin/gcc -shared -s -static-libgcc -o qsea.dll tmp.def lm.o -LC:/extsoft/lib/x64 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.13-/R/bin/x64 -lR
installing to C:/Users/biocbuild/bbs-3.13-bioc/meat/qsea.buildbin-libdir/qsea/libs/x64
** testing if installed package can be loaded
No methods found in package 'IRanges' for request: 'values' when loading 'qsea'
* MD5 sums
packaged installation of 'qsea' as qsea_1.18.0.zip
* DONE (qsea)