############################################################################## ############################################################################## ### ### Running command: ### ### rm -rf qsea.buildbin-libdir && mkdir qsea.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh qsea_1.18.0.tar.gz /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R qsea.buildbin-libdir ### ############################################################################## ############################################################################## >>>>>>> >>>>>>> INSTALLATION WITH 'R CMD INSTALL --preclean --no-multiarch --library=qsea.buildbin-libdir qsea_1.18.0.tar.gz' >>>>>>> * installing *source* package ‘qsea’ ... ** using staged installation ** libs clang -mmacosx-version-min=10.13 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c lm.c -o lm.o clang -mmacosx-version-min=10.13 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/usr/local/lib -o qsea.so lm.o -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation installing to /Users/biocbuild/bbs-3.13-bioc/meat/qsea.buildbin-libdir/00LOCK-qsea/00new/qsea/libs ** R ** inst ** preparing package for lazy loading No methods found in package ‘IRanges’ for request: ‘values’ when loading ‘qsea’ ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location No methods found in package ‘IRanges’ for request: ‘values’ when loading ‘qsea’ ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location No methods found in package ‘IRanges’ for request: ‘values’ when loading ‘qsea’ ** testing if installed package keeps a record of temporary installation path * DONE (qsea) >>>>>>> >>>>>>> FIXING LINKS FOR qsea.buildbin-libdir/qsea/libs/qsea.so >>>>>>> install_name_tool -change "/usr/local/lib/libgcc_s.1.dylib" "/Library/Frameworks/R.framework/Versions/4.1/Resources/lib/libgcc_s.1.dylib" "qsea.buildbin-libdir/qsea/libs/qsea.so" install_name_tool -change "/usr/local/lib/libgfortran.5.dylib" "/Library/Frameworks/R.framework/Versions/4.1/Resources/lib/libgfortran.5.dylib" "qsea.buildbin-libdir/qsea/libs/qsea.so" install_name_tool -change "/usr/local/lib/libquadmath.0.dylib" "/Library/Frameworks/R.framework/Versions/4.1/Resources/lib/libquadmath.0.dylib" "qsea.buildbin-libdir/qsea/libs/qsea.so"