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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/qPLEXanalyzer_1.10.0.tar.gz && rm -rf qPLEXanalyzer.buildbin-libdir && mkdir qPLEXanalyzer.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=qPLEXanalyzer.buildbin-libdir qPLEXanalyzer_1.10.0.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL qPLEXanalyzer_1.10.0.zip && rm qPLEXanalyzer_1.10.0.tar.gz qPLEXanalyzer_1.10.0.zip
###
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100 3890k  100 3890k    0     0  3745k      0  0:00:01  0:00:01 --:--:-- 3748k

install for i386

* installing *source* package 'qPLEXanalyzer' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
Note: wrong number of arguments to '==' 
Note: wrong number of arguments to '==' 
** help
*** installing help indices
  converting help for package 'qPLEXanalyzer'
    finding HTML links ... done
    ER_ARID1A_KO_MCF7                       html  
    IRSnorm                                 html  
    finding level-2 HTML links ... done

    assignColours                           html  
    computeDiffStats                        html  
    convertToMSnset                         html  
    corrPlot                                html  
    coveragePlot                            html  
    exp2_Xlink                              html  
    exp3_OHT_ESR1                           html  
    getContrastResults                      html  
    groupScaling                            html  
    hierarchicalPlot                        html  
    human_anno                              html  
    intensityBoxplot                        html  
    intensityPlot                           html  
    maVolPlot                               html  
    mergePeptides                           html  
    mouse_anno                              html  
    normalizeQuantiles                      html  
    normalizeScaling                        html  
    pcaPlot                                 html  
    peptideIntensityPlot                    html  
    plotMeanVar                             html  
    qPLEXanalyzer-package                   html  
    regressIntensity                        html  
    rliPlot                                 html  
    rowScaling                              html  
    summarizeIntensities                    html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'qPLEXanalyzer' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'qPLEXanalyzer' as qPLEXanalyzer_1.10.0.zip
* DONE (qPLEXanalyzer)
* installing to library 'C:/Users/biocbuild/bbs-3.13-bioc/R/library'
package 'qPLEXanalyzer' successfully unpacked and MD5 sums checked