############################################################################## ############################################################################## ### ### Running command: ### ### rm -rf msPurity.buildbin-libdir && mkdir msPurity.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=msPurity.buildbin-libdir msPurity_1.18.0.tar.gz ### ############################################################################## ############################################################################## install for i386 * installing *source* package 'msPurity' ... ** using staged installation It is recommended to use 'given' instead of 'middle'. It is recommended to use 'given' instead of 'middle'. ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'msPurity' finding HTML links ... done Getfiles html assessPuritySingle html averageAllFragSpectra-purityA-method html averageInterFragSpectra-purityA-method html averageIntraFragSpectra-purityA-method html averageSpectra-purityD-method html averageSpectraSingle html combineAnnotations html createDatabase html createMSP-purityA-method html create_database html dimsPredictPurity-purityD-method html dimsPredictPuritySingle html filterFragSpectra-purityA-method html filterp-purityD-method html flag_remove html frag4feature-purityA-method html getP-purityD-method html get_additional_mzml_meta html groupPeaks-purityD-method html groupPeaksEx html initialize-purityD-method html iwNormGauss html iwNormQE.5 html iwNormRcosine html msPurity html pcalc html purityA html purityD-class html purityX html show-purityA-method html show-purityD-method html show-purityX-method html spectralMatching html spectral_matching html subtract-purityD-method html subtractMZ html validate-purityA-method html writeOut-purityD-method html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'msPurity' ... ** testing if installed package can be loaded * MD5 sums packaged installation of 'msPurity' as msPurity_1.18.0.zip * DONE (msPurity)