Back to Multiple platform build/check report for BioC 3.13
ABCDEFGHIJKL[M]NOPQRSTUVWXYZ

This page was generated on 2021-10-15 15:06:11 -0400 (Fri, 15 Oct 2021).

INSTALL results for metagene on tokay2

To the developers/maintainers of the metagene package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/metagene.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 1084/2041HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
metagene 2.24.0  (landing page)
Charles Joly Beauparlant
Snapshot Date: 2021-10-14 04:50:12 -0400 (Thu, 14 Oct 2021)
git_url: https://git.bioconductor.org/packages/metagene
git_branch: RELEASE_3_13
git_last_commit: f85b3d4
git_last_commit_date: 2021-05-19 12:06:34 -0400 (Wed, 19 May 2021)
nebbiolo1Linux (Ubuntu 20.04.2 LTS) / x86_64  OK    OK    ERROR  
tokay2Windows Server 2012 R2 Standard / x64  OK    OK    ERROR    OK  
machv2macOS 10.14.6 Mojave / x86_64  OK    OK    ERROR    OK  

Summary

Package: metagene
Version: 2.24.0
Command: C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/metagene_2.24.0.tar.gz && rm -rf metagene.buildbin-libdir && mkdir metagene.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=metagene.buildbin-libdir metagene_2.24.0.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL metagene_2.24.0.zip && rm metagene_2.24.0.tar.gz metagene_2.24.0.zip
StartedAt: 2021-10-14 10:36:52 -0400 (Thu, 14 Oct 2021)
EndedAt: 2021-10-14 10:39:09 -0400 (Thu, 14 Oct 2021)
EllapsedTime: 137.4 seconds
RetCode: 0
Status:   OK  

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/metagene_2.24.0.tar.gz && rm -rf metagene.buildbin-libdir && mkdir metagene.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=metagene.buildbin-libdir metagene_2.24.0.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL metagene_2.24.0.zip && rm metagene_2.24.0.tar.gz metagene_2.24.0.zip
###
##############################################################################
##############################################################################


  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
 66 4876k   66 3251k    0     0  3204k      0  0:00:01  0:00:01 --:--:-- 3206k
100 4876k  100 4876k    0     0  3696k      0  0:00:01  0:00:01 --:--:-- 3699k

install for i386

* installing *source* package 'metagene' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'metagene'
    finding HTML links ... done
    Bam_Handler                             html  
    avoid_gaps_update                       html  
    bed_file_filter                         html  
    exon_by_gene_with_observed_transcripts
                                            html  
    get_demo_bam_files                      html  
    get_demo_design                         html  
    get_demo_metagene                       html  
    get_demo_regions                        html  
    get_promoters_txdb                      html  
    metagene                                html  
    permutation_test                        html  
    plot_metagene                           html  
    promoters_hg18                          html  
    promoters_hg19                          html  
    promoters_mm10                          html  
    promoters_mm9                           html  
    write_bed_file_filter_result            html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'metagene' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'metagene' as metagene_2.24.0.zip
* DONE (metagene)
* installing to library 'C:/Users/biocbuild/bbs-3.13-bioc/R/library'
package 'metagene' successfully unpacked and MD5 sums checked